Capnocytophaga endodontalis: CBG49_01345
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Entry
CBG49_01345 CDS
T04940
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
capn
Capnocytophaga endodontalis
Pathway
capn03030
DNA replication
capn03410
Base excision repair
capn03420
Nucleotide excision repair
capn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBG49_01345
03410 Base excision repair
CBG49_01345
03420 Nucleotide excision repair
CBG49_01345
03440 Homologous recombination
CBG49_01345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capn03032
]
CBG49_01345
03400 DNA repair and recombination proteins [BR:
capn03400
]
CBG49_01345
Enzymes [BR:
capn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBG49_01345
DNA replication proteins [BR:
capn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CBG49_01345
DNA repair and recombination proteins [BR:
capn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CBG49_01345
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBG49_01345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
Pro-kuma_activ
HHH_5
HHH
DUF6387
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ASF41842
UniProt:
A0A1Z4BKQ5
LinkDB
All DBs
Position
complement(288861..291647)
Genome browser
AA seq
928 aa
AA seq
DB search
MKKRLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAILGFMNSLFEVIKKEKPDHLAVAF
DKGGSVARTELFTDYKANREETPEAIRLAIPYIHEILKALHIPIIEKEGYEADDIIGTLS
KQAEAQDYQVFMVTPDKDYAQLVSDNIFMYRPARSGNDIEIWGVKEVQEKFEVQNPLQVI
DFLGMMGDAVDNIPGLPGVGEKTAKKLLADFGSMENLLANTDKLKGKLRENIENNKEKGL
LSKQLATIMLDVPVTFDEADFAMSQPDFEAVGKIFDELEFRQLLQNFLKTYQPEAVVQTP
PKAASGQLDLFSQGDLFAQQQLVSDKKNSSNTPHFYQLADTPMAQQLLLQSLLQQTEVCF
DTETTNINALEAELVGISFCWAAHKGHYLPFPKEKEAATKLIEQFRPFFENEQIAKVGQN
LKYDLKVLQNYGIEVQGALFDTMIAHYLLNPDMRHNMDILSETYLNYTPIAIESLIGKGK
TQRSMRTVPIDEVKEYAVEDADVTWQLKNVFQSQMPQVNAQKIYTDLEAPLIKVLAAMER
EGVNLDVDFLKEYAKTLDADIAQLETAIAEQAGETFNLASPKQLGDILFEKLKIDSKPKK
TKTGQYATSEEVLAPFAAKHKIVADILEWRQVQKLKSTYVDALPLEVNKSTGRVHTTYMQ
TVAATGRLSSNNPNLQNIPIRTPRGQQVRKAFIARNPDYVLLSADYSQIELRIIAALSEE
HNMIESFLRNEDIHRSTAAKVFNVPLEEVTREQRSHAKTVNFGIIYGVSAFGLSAQTDLS
RSESKELIDTYYATYPNLRNYINKQIEFARQHGYVETILGRRRYLPDIHSHNQVVRGGAE
RNAVNAPIQGSAADIIKIAMIRIHNQLQAQKLQTCMLLQVHDELVFDVPKAELELVKPLV
KEAMENAFTLAVPLVADLGVGNNWLDAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgccttttcctcctcgatgcttatgcccttatttttaggggctactacgcc
tttatcaagaacccgcgcatcaattccaaaggattgaacacttcggcgattctcggcttt
atgaactcccttttcgaggtgattaaaaaagaaaaacccgaccatctcgctgtcgctttc
gacaaaggagggagcgtagcacgcaccgaactctttaccgactataaagccaatcgcgag
gaaacccccgaagcgattcgtttggctatcccctatatccacgaaatactcaaggctttg
cacatccctatcatcgaaaaagaggggtacgaagccgatgatatcatcggaacgctctct
aaacaagccgaagctcaagattaccaagtgtttatggtaacccccgacaaagactatgcg
cagctggtgagcgataatatctttatgtaccgacctgcgcgctcgggcaatgatatcgaa
atttggggtgtgaaagaggtgcaagagaaatttgaagtgcaaaaccctttgcaggtgatt
gatttcctgggtatgatgggcgatgctgtcgataatattcctgggctgcctggggtaggc
gagaagaccgccaaaaagctactcgccgattttggctctatggaaaatctcctcgctaat
actgataaactaaaaggcaaactgcgtgaaaatatagaaaataacaaggaaaaaggcttg
ctctccaaacaattggcaaccattatgctcgatgtgccggtaacttttgatgaagccgat
tttgcaatgtctcaacccgattttgaagcggtgggcaagattttcgatgagttagagttc
cgtcagttgctacaaaatttcctaaaaacctaccaaccagaagctgtggtacaaactccc
cctaaggctgcttcaggtcagctggatttattctcacaaggcgacctctttgcgcagcag
caattggtgagcgataagaaaaacagcagcaatacgcctcatttctaccaattagccgat
accccaatggcacaacaactcttgttgcaaagcctattgcaacaaactgaagtgtgtttt
gataccgaaactactaatataaacgctctcgaagctgaattagtgggtatttccttctgc
tgggcagctcataaagggcattatttgccatttcctaaagaaaaagaagcagctactaag
ctcatagagcaattccgtccgttttttgagaatgaacagatagctaaagtaggtcagaat
ttgaaatacgacctcaaagtgttgcaaaactatggaattgaggtacagggcgctctcttc
gatacgatgatagcccattacctgctaaatcccgatatgcgtcacaatatggatatcctc
agcgaaacctacctgaactatacacctattgctatcgagagccttattggcaaagggaaa
acccagcgatctatgcgtaccgtgcctatcgatgaggtaaaggaatacgctgtggaagat
gccgatgttacttggcaactcaaaaatgtgttccaaagccaaatgccccaagtaaatgcc
caaaaaatctatactgatttagaggcacctcttatcaaagtgttggcagctatggaacgc
gaaggggtaaacctcgatgtggattttttaaaagaatacgctaaaaccttagatgccgat
attgcccaactcgaaacagccatagccgagcaggctggcgagactttcaatttggcatca
cctaaacaactcggcgacattctctttgaaaaactgaagattgacagcaaacctaaaaag
acgaaaaccggtcagtatgctacttccgaagaagtcttagcgccttttgcagccaaacat
aaaatcgtagccgatatattggaatggcgacaagtgcagaaactcaaatctacttatgta
gatgccttgcctttagaggtaaataaaagtacgggtcgtgtgcatactacctatatgcaa
acagtagcagctacaggtcgactcagcagcaacaaccctaacttgcagaatatccctatc
cgcacccctcgtgggcagcaggtgcgcaaggcgtttatcgctcgcaatcccgattatgtg
ctcctctctgccgactattcgcaaatcgaactccgcatcatcgctgccctcagcgaagaa
cacaatatgattgagtccttcctccgcaatgaggatattcaccgttctacagcggcaaag
gtattcaatgtcccattggaagaggtaacccgcgagcaacgtagccacgccaaaacagtg
aattttgggattatttatggcgtatcggcatttgggctatctgcacaaaccgacctctct
cgctccgaaagcaaagaactgatagacacctattacgctacctatcctaacctccgcaac
tatatcaataaacaaatagagtttgcccgacaacacggctatgtagaaaccattttaggc
agacgccgttatctgcccgatattcattcacataaccaagtagtgcgtggaggcgccgag
cgcaacgccgtgaatgcccctatacaaggctcagcagccgatattatcaaaatcgcaatg
atacgcatacacaaccagttgcaagcccaaaaactccaaacttgtatgctcctccaagta
cacgacgagttggtgttcgatgtgcctaaagccgaattagaactcgtaaaaccccttgtc
aaagaagcgatggaaaacgcctttacccttgccgttcccctcgtcgccgatttaggtgta
ggtaacaactggctcgacgcacattaa
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