Capnocytophaga endodontalis: CBG49_04055
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Entry
CBG49_04055 CDS
T04940
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
capn
Capnocytophaga endodontalis
Pathway
capn00521
Streptomycin biosynthesis
capn00523
Polyketide sugar unit biosynthesis
capn00541
Biosynthesis of various nucleotide sugars
capn01100
Metabolic pathways
capn01110
Biosynthesis of secondary metabolites
capn01250
Biosynthesis of nucleotide sugars
Module
capn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CBG49_04055 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CBG49_04055 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CBG49_04055 (rfbC)
Enzymes [BR:
capn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CBG49_04055 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ASF42323
UniProt:
A0A1Z4BM26
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All DBs
Position
850748..851296
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AA seq
182 aa
AA seq
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MKVIKTKLEGVVIIEPQVFFDGRGYFFESFSQQRFNEQVAPITFVQDNESKSSYGVLRGL
HFQKPPFAQSKLVRVVKGKVLDVAVDLRKGSPTFGQYESVVLSEENKRQFFIPQGFAHGF
AVLSEEAIFQYKCDKYYAPHSEGSVRWNDPTIAIDWLLPEKDIILSTKDEQAPLLSQLTI
ND
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatcaaaactaaattagaaggtgtcgtgattatagaaccacaagtatttttt
gacggcagaggctattttttcgagtcgttttcacaacaacgcttcaacgagcaagtagcc
cccatcacatttgtgcaggacaacgaatcaaaatcaagttatggtgtattgcgcggcttg
cacttccaaaagccccctttcgcacaatctaaattagtacgagttgtgaaaggcaaagtg
ttagacgttgcggttgatttacgcaaaggttcacccacctttgggcaatacgaatcggta
gtgcttagcgaggaaaacaaacgacagttttttattccacaaggctttgctcacggtttt
gcagtgctcagtgaagaagctatttttcagtataaatgcgacaagtactacgcccctcac
agcgagggaagtgtgcgttggaacgaccctactatagccatagattggctattgcccgag
aaagacattatcctatcaacaaaagatgaacaagccccactcttatcacaattaacaatt
aacgattga
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