KEGG   Capnocytophaga endodontalis: CBG49_04260
Entry
CBG49_04260       CDS       T04940                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
capn  Capnocytophaga endodontalis
Pathway
capn00740  Riboflavin metabolism
capn01100  Metabolic pathways
capn01110  Biosynthesis of secondary metabolites
capn01240  Biosynthesis of cofactors
capn02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:capn00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CBG49_04260 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CBG49_04260 (ribD)
Enzymes [BR:capn01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CBG49_04260 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CBG49_04260 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD APOBEC_N APOBEC3 SNAD4
Other DBs
NCBI-ProteinID: ASF42353
UniProt: A0A1Z4BM88
LinkDB
Position
complement(905484..906455)
AA seq 323 aa
MIKRCIQLAYNGLGTTYPNPLVGCVIVHEGKIIGEGWHQKAGEPHAEVRAIASVKDKSLL
SESTLYVSLEPCSHYGKTPPCADLIIAHCIPRVVIGTIDPFAKVAGRGIEKLRTAGCEVT
VGVMEKECRELNKRFFTFHEKKRPYIFLKWAETADGFIAPALKDTLAPVWITDAYTRQEV
HKMRSEEQAILVGVGTVLADNPSLDTRDWYGKNPLRVIIDPHLRSPKEFKVWNDQQPTLF
ITNKEKVSNKSYGLQTEVIGIDLSRNVPQQICDLLYQRNIQSLIVEGGAYTLQQFINAGL
YDEMRIYKSEVSFGEGVKAPQIS
NT seq 972 nt   +upstreamnt  +downstreamnt
atgataaaacgctgtatacaattagcttataatggacttggcactacatatcctaatcct
ctggtaggttgtgtgatagtgcacgaagggaaaatcatcggtgagggctggcaccaaaaa
gcaggtgagcctcacgccgaagtgcgtgctattgcctcagtgaaagacaagtcgctactg
tctgaaagtacgctctatgtgagtttagagccttgcagtcattatggcaaaacaccccct
tgcgccgatttgattatcgcacactgcattccccgcgtggtgattggcacgatcgacccc
tttgctaaagtcgctggtcgtggtattgaaaaactgcggactgcgggctgtgaagtaaca
gtgggggtaatggaaaaagaatgtagggaactcaacaaacgcttttttacctttcacgag
aaaaaacgcccttatatcttcctcaaatgggcagaaactgccgatggctttatcgctcct
gctctcaaagatacgcttgctcctgtgtggattaccgatgcttatacacgccaagaagta
cacaaaatgcgcagtgaagaacaagctatattagtaggcgtaggcactgtattagccgac
aatccttcgctcgacacccgcgattggtatggcaaaaatccgctacgggtaattatcgac
cctcacttgcgctctcctaaagagtttaaagtgtggaacgaccaacagccaacgcttttc
ataactaacaaggaaaaagtaagtaataaaagttatgggctacaaacagaagtaataggc
atcgacctcagccgcaacgtacctcaacaaatctgtgacctgctctaccagcgcaatatc
caaagccttatagtagagggaggtgcatacaccctgcaacaatttatcaatgcaggttta
tacgacgaaatgcgtatctacaaaagcgaagtgagtttcggcgaaggtgtgaaagcccca
caaatcagctaa

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