Capnocytophaga endodontalis: CBG49_05030
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Entry
CBG49_05030 CDS
T04940
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
capn
Capnocytophaga endodontalis
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capn03400
]
CBG49_05030
DNA repair and recombination proteins [BR:
capn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBG49_05030
Archaeal homologous recombinant proteins
CBG49_05030
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Nop
Motif
Other DBs
NCBI-ProteinID:
ASF42487
UniProt:
A0A1Z4BMM5
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Position
complement(1059752..1060975)
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AA seq
407 aa
AA seq
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MNFLHTADWHLGQTFYQYDRYEEQQFFLNTLLQLLETEAIEVLLISGDVFDTANPSVAAT
KQFYHFLHQATERFPHLQIIAIAGNHDSPVRLEMPQPLLENTQVHLIGHIKRNEIHEIDY
DALILPLYSKGEIVAYCLAVPFLRLGDTPKTDDFSDYGKGIATFYQEITERALAIANGKP
LIAMGHLHASGAELSEEDTAERPIIGGMESISPSSFPKALQYIALGHIHKAQALGDTHIR
YAGSPIPLSFSEKHYTHQVVTFSIENGQVQGIKPIPLPIHIPLLSIPERALPPEEVLHLL
TALPEATSESAAPYLEVKVLLKEPAPELKNSILKTIANKHVRLARIDVRYQQQNKTQQTV
LQSELTLNDLQPYEVLQRVYENKYHEPLPDFYKPLFEEAMGLVESEE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaactttctacatactgccgattggcatttaggacaaacattctaccaatacgaccgt
tacgaagagcagcaatttttcctaaacactctcctacaactactggaaactgaagctatt
gaggtactccttatcagtggtgatgtgttcgatactgctaacccttcggtagctgctact
aaacaattctatcacttcttacaccaagctaccgaacgtttcccccacttacaaattatt
gctattgcaggtaatcacgattctcccgtgcggcttgaaatgcctcagcctcttttagaa
aatactcaagtgcacttaataggacacatcaagcgaaacgaaattcacgaaattgactac
gatgctcttatccttccactttacagcaaaggcgagattgtagcttactgtcttgctgtg
ccttttctgcgtttaggcgatacacctaaaactgatgatttttcggattacggtaaggga
attgccactttttaccaagaaattaccgaaagagctttggctattgccaacggtaaaccg
ctgattgctatgggacacttacacgcctcgggggctgaactcagcgaagaagatactgcc
gaacgtcctatcattgggggaatggagagtatatctccctcaagttttccaaaagcactc
caatatattgctttagggcatattcacaaagcacaagccttgggcgatacacatatacgt
tatgcaggaagtcctatccctctttcattttctgaaaaacactatacccaccaagttgta
actttttctatagaaaacggacaagtacaaggtatcaaacctattcctctacctatccac
atccctttgctcagtattcctgagcgcgcacttcctcctgaggaggttttacatcttctc
acagctttacccgaagcaacaagtgagagtgcagcgccttatttagaagtgaaagtactg
ctcaaagagcccgctcccgaactgaaaaatagcattctaaaaactattgctaacaagcac
gtgcgcttagcgcgtattgatgtgcgctaccagcaacaaaacaaaactcaacaaacagtt
ttacaaagcgaactcaccctcaacgacttacagccttatgaggtattacagcgcgtatac
gaaaacaaataccacgaacctctacccgatttttacaaacccttgtttgaagaggcaatg
gggttagtggaaagtgaagaatga
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