Capnocytophaga endodontalis: CBG49_05250
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Entry
CBG49_05250 CDS
T04940
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
capn
Capnocytophaga endodontalis
Pathway
capn03030
DNA replication
capn03430
Mismatch repair
capn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBG49_05250 (holA)
03430 Mismatch repair
CBG49_05250 (holA)
03440 Homologous recombination
CBG49_05250 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capn03032
]
CBG49_05250 (holA)
03400 DNA repair and recombination proteins [BR:
capn03400
]
CBG49_05250 (holA)
Enzymes [BR:
capn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBG49_05250 (holA)
DNA replication proteins [BR:
capn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBG49_05250 (holA)
DNA repair and recombination proteins [BR:
capn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBG49_05250 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
TnpB_IS66
Motif
Other DBs
NCBI-ProteinID:
ASF42529
UniProt:
A0A1Z4BMJ7
LinkDB
All DBs
Position
1116597..1117610
Genome browser
AA seq
337 aa
AA seq
DB search
MNEVKTIVGNIKKGIIAPIYFLMGEEPYFIDIVSNYIEEHVLQEDQKGFDQIVLYGQDVT
VPTIIDYARRFPMMSDRQVIIVKEAQNLRATIDQLVPYVENPTPTTVLVFCYKYEKLDAR
KKLLKTLQKNKDCVLLESKKLYEPQVAAWLPDVLKKKHLSIQPKAIQMLVDFLGTDLSRI
QNEVNKLALIVPENTEVTPEIIEKNIGISKEFNNFELKSAIAANDAYKVARILKHFADNP
KDNPLGGTITVLYNYFQKLLLFHGLTDQSEKNVAAVLKENPYFIKEFYSGAQHYPMKRVS
AIIATLRQIDLKSKGVGATNNLTEADFRKELIIMLRA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagtaaaaaccattgtaggcaacataaaaaaaggcatcatcgctcctatctac
tttttgatgggcgaagaaccttatttcatagatatagtatccaattacatcgaagagcac
gtgttgcaagaagaccaaaagggtttcgaccaaatcgtgctttatggtcaagatgtaacg
gtgcctacgattattgattatgcgcgccgttttccgatgatgagcgaccgccaagtgatt
atcgttaaagaagcacaaaacctcagagcgaccatcgaccagttagtgccttatgtagag
aaccctacccctacaacggttttggtattctgttacaaatacgagaagttagacgcacgc
aaaaaactgctaaaaaccttacaaaagaacaaagattgcgtactactcgaaagcaaaaaa
ctttatgaaccccaagtagccgcttggttacccgatgtattgaagaaaaaacacctcagc
attcagcctaaagccatacaaatgttagtagatttcttaggtaccgacctgagtaggata
caaaatgaggtgaataaattagcccttatcgtccctgaaaataccgaagtgacccccgaa
attatagagaaaaatataggtattagcaaggagtttaacaattttgagctcaagagtgct
attgccgcaaacgatgcctataaggtagcgcgtatccttaaacacttcgctgataatcct
aaagataaccctttaggtggaactatcactgttctctataactattttcaaaagttattg
ctatttcatggtctcacagaccaaagtgaaaagaatgtagcggcagtattgaaagaaaat
ccttattttataaaagagttttattcgggggcacaacactaccctatgaagcgcgtgagt
gctatcattgctacgctgcgccaaatcgacctaaaaagcaaaggggtaggcgctaccaat
aacctcacagaagccgactttcgcaaagaactgattataatgttacgagcgtaa
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