Capnocytophaga endodontalis: CBG49_08110
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Entry
CBG49_08110 CDS
T04940
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
capn
Capnocytophaga endodontalis
Pathway
capn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CBG49_08110 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capn03400
]
CBG49_08110 (priA)
Enzymes [BR:
capn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBG49_08110 (priA)
DNA repair and recombination proteins [BR:
capn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBG49_08110 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
nSTAND3
Cas3-like_C_2
TrmB
CjCas9_WED-like
Zn_Ribbon_TF
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ASF43040
UniProt:
A0A1Z4BP85
LinkDB
All DBs
Position
complement(1817897..1820347)
Genome browser
AA seq
816 aa
AA seq
DB search
MYFVEVILPLPLPKLYTYRINEDEAHFLQTGMRVAVSFGKSKVYTALVHKVHTNEPTYET
KDIEYILDETPIVTPNQITHWQWIADYYMCTLGEVIKSALPSAFLLESETVIEIAEKDLN
PYLFSDDEFQVYEALHYKTALKGSEVSKIIPKKKTLKVIKSLVEKGATRISERIFEKYVP
KLVKYIRLAEAYQSQEGLQKALELLKGEKQKKLIMAYFNHINREVLPLKVENLLEEAKVS
NAVLKSVVEKGILEIYYLQKDRVSFADSEVLAKKTLNNIQNEALYQVQEQFQTKNTVLLQ
GVTASGKTEIYIELIDQYLKKGKQVLYLLPEIALTIHLINRLKKHFGKNLSVYHSKYNTN
ERVEVWNNVLNNCSKAQLVVGVRSSVYLPFKDLGLVVIDEEHDSSYRQFDPAPRLQARDS
AIMLANIFKAKTLLGTATPSIESMHNVKVGKYGFVYLSKRYTNFLPPIIELIDIKDKQHR
KRMNGHFSDILIEEITNTLSQGKQVLLFQNRRGYAPIVQCMHCGTVPQCPHCDVSLTFHH
SSNQLRCHYCGYAIPMPKTCIACGSVDLKTKGFGTEQISKELEVLFPQVAIDRMDQDTTN
GKYGYEKILAKFEQQETQILVGTQMISKGLDFENIGLVGVMNADALIHSPDYRAYERSFQ
LLLQVSGRAGRSAQRGKVLIQTYNPQHPVIQQVLQNDFKGMYQNQIEERQSFSYPPFVQM
IKITLKHTNFNRTNEGAEWFANALKEAFASKKGIEILGPEFPLISRIRNEYLKDVLVKVK
PSELSIHHTKEQIKRIETSFQSISNFRTIRVSYLID
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgtactttgtagaagtcatattaccacttccgcttcctaaattgtacacttatcgtatc
aacgaggatgaagcgcatttcttgcaaacgggaatgcgtgtagctgtttcatttggcaaa
tcaaaagtatatacagctttagttcataaagtgcatactaatgaacctacttatgaaact
aaagatatcgaatacattctagacgaaactcccatcgttactcctaatcaaattactcat
tggcaatggattgccgattattatatgtgtactttaggtgaggtgataaaatcggcttta
ccatcagcttttttgttagaaagtgaaactgttattgaaattgctgaaaaagacctcaat
ccctatctatttagcgatgacgaatttcaggtgtacgaagctctacactacaaaacagca
ttaaaaggaagtgaagtgagcaaaatcattcctaaaaagaagactttgaaggtcataaag
agtttggtagaaaaaggtgctactcgtatttcagaaagaatttttgaaaaatatgtacca
aagctcgtaaaatacatacgtttagcggaagcctaccaatctcaagaaggactacaaaaa
gctttagaattgctgaaaggtgaaaagcaaaaaaaactgataatggcttacttcaatcat
atcaacagagaggttttacctttaaaagttgaaaatctattagaagaagctaaggtttca
aatgcggtactcaaatcggtggtagaaaaaggtattttagaaatatattacctgcaaaaa
gatcgtgtaagtttcgctgatagtgaggttttagcaaaaaaaacactcaacaatatacaa
aacgaagcgctttatcaagtacaagaacagtttcaaactaaaaatacagtacttttacaa
ggtgttacggcttctggtaaaaccgaaatctacattgaacttatcgaccaatacctaaag
aaaggtaaacaagtgctttacttactcccagaaatcgccttgacaattcatcttatcaat
cgattgaaaaaacactttggtaaaaatctatcagtatatcattctaaatacaatactaac
gagcgcgtagaggtttggaacaatgtactgaacaattgctccaaagcacaattagtagta
ggggtgcgttcttcagtatatctgcctttcaaagatttaggattagtggtaattgatgag
gaacacgatagttcatatcgtcagttcgaccctgctcctcgcttgcaagcgcgtgatagt
gccattatgctagctaacatcttcaaagctaaaactttattaggtacagctactccctca
atagaaagtatgcacaacgtaaaggtaggtaaatatggctttgtctatctatcaaaacgt
tatactaatttcctcccccctatcatcgaacttatcgacatcaaggacaagcaacatcgc
aaacgtatgaatggacatttttccgatattcttattgaagaaataaccaatactttatca
caaggaaaacaagtgcttttgttccaaaaccgaagaggttatgcacctattgtacagtgt
atgcattgcggcacagtccctcaatgcccacattgcgatgtgagtctcactttccaccat
agtagcaatcagttgcgatgtcattattgtggctatgcaatacctatgcccaaaacttgt
attgcttgtggaagtgtagatttaaaaacaaaaggttttggtactgaacagattagtaaa
gaattagaagtacttttcccccaagtagccatcgaccgaatggatcaagatactaccaat
ggcaaatacggatatgaaaaaatattagccaaatttgaacagcaagaaacccaaatattg
gtaggtacccaaatgatttctaaaggattagattttgaaaatataggattagtaggagta
atgaatgccgatgctctcattcattctcccgactatcgagcttatgaacgtagttttcag
ttgttattacaagtctcagggcgtgcaggtagaagtgctcaacgaggaaaagttttaata
caaacctacaatcctcaacaccctgtaattcaacaagtattacaaaatgatttcaagggg
atgtatcaaaatcaaatagaggaacgccaatctttctcgtatcctccatttgtacaaatg
attaaaataacactgaaacacacgaacttcaatcgtacaaatgaaggtgctgagtggttc
gctaatgctcttaaagaagcttttgcttccaaaaagggaatagaaattttaggtcctgag
tttcccttaatttcacgcatcagaaacgaatatttgaaagatgttttagtgaaggtaaaa
ccttctgaactttctatacatcatactaaagaacaaatcaaacgtatagaaaccagtttt
cagtctattagtaattttcgtaccataagagttagttatttgattgattaa
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