Capnocytophaga endodontalis: CBG49_11405
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Entry
CBG49_11405 CDS
T04940
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
capn
Capnocytophaga endodontalis
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capn03032
]
CBG49_11405
03036 Chromosome and associated proteins [BR:
capn03036
]
CBG49_11405
03400 DNA repair and recombination proteins [BR:
capn03400
]
CBG49_11405
DNA replication proteins [BR:
capn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CBG49_11405
Chromosome and associated proteins [BR:
capn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CBG49_11405
DNA repair and recombination proteins [BR:
capn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CBG49_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF2267
NTPase_P4
SasG_E
TrbI_Ftype
Motif
Other DBs
NCBI-ProteinID:
ASF43635
UniProt:
A0A1Z4BQR5
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All DBs
Position
2524808..2525086
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AA seq
92 aa
AA seq
DB search
MNKTELIDAIAAEAGLTKADAKKAVEAFFSSVEKSLKQGKKVAIVGFGSWSVAKKEARDA
RNPRTGAVIKVPAKKVVKFKAGTELSESVNKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaattaatcgatgcaattgctgcagaagctggcttgacaaaagctgat
gctaaaaaagcagtagaagcgttcttttcaagtgttgaaaagagccttaaacaaggtaaa
aaggtagctatcgtaggcttcggatcttggtcagtagctaagaaagaggcaagagatgca
agaaatcctcgtactggtgctgttatcaaagttcctgctaagaaagtagtaaaattcaaa
gctgggactgaactttctgaatcagtaaacaaaaagtaa
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