KEGG   Capnocytophaga endodontalis: CBG49_11405
Entry
CBG49_11405       CDS       T04940                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
capn  Capnocytophaga endodontalis
Brite
KEGG Orthology (KO) [BR:capn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:capn03032]
    CBG49_11405
   03036 Chromosome and associated proteins [BR:capn03036]
    CBG49_11405
   03400 DNA repair and recombination proteins [BR:capn03400]
    CBG49_11405
DNA replication proteins [BR:capn03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CBG49_11405
Chromosome and associated proteins [BR:capn03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CBG49_11405
DNA repair and recombination proteins [BR:capn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CBG49_11405
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-DNA_bdg DUF2267 NTPase_P4 SasG_E TrbI_Ftype
Other DBs
NCBI-ProteinID: ASF43635
UniProt: A0A1Z4BQR5
LinkDB
Position
2524808..2525086
AA seq 92 aa
MNKTELIDAIAAEAGLTKADAKKAVEAFFSSVEKSLKQGKKVAIVGFGSWSVAKKEARDA
RNPRTGAVIKVPAKKVVKFKAGTELSESVNKK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattaatcgatgcaattgctgcagaagctggcttgacaaaagctgat
gctaaaaaagcagtagaagcgttcttttcaagtgttgaaaagagccttaaacaaggtaaa
aaggtagctatcgtaggcttcggatcttggtcagtagctaagaaagaggcaagagatgca
agaaatcctcgtactggtgctgttatcaaagttcctgctaagaaagtagtaaaattcaaa
gctgggactgaactttctgaatcagtaaacaaaaagtaa

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