Capnocytophaga endodontalis: CBG49_11445
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Entry
CBG49_11445 CDS
T04940
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
capn
Capnocytophaga endodontalis
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
capn03016
]
CBG49_11445 (truB)
Enzymes [BR:
capn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CBG49_11445 (truB)
Transfer RNA biogenesis [BR:
capn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CBG49_11445 (truB)
Prokaryotic type
CBG49_11445 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TonB_C
Motif
Other DBs
NCBI-ProteinID:
ASF43643
UniProt:
A0A1Z4BR00
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All DBs
Position
2529856..2531484
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AA seq
542 aa
AA seq
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MITPEEFSEGRILLIDKPLQWSSFQAVNKIKWAILKHYKLKKIKIGHAGTLDPLASGLLV
ICTGKFTKKITEIQDAVKTYTGTITLGATTPSYDMETEIDTRYPTDHITPELIEQVRKQF
MGELVQTPPVFSAIKKEGKRLYEFARDGKEIEVPQRTIYIHNFTIDASQFPELHFEVVCS
KGTYIRSLAKDFGKALGSGGYLSALRRTKIGDFSVSDAISPEEFVSTHIPDLRKHPLPPI
ILTTVVGEPQENKVLNDRFANRNKTINSQFEREETPPSHPTGELNMEAIFPRRKAQKTSG
LQYELRAFMRMFTNTDKAITITLLILFCTVLTLMVIQLNDKKKEIMIEMALTPDDLPQEP
PQPEETSPNADIPTNNTKLTTNAYNQADASLQHTDDFKTLDEIMAERAAQEMAAAKEELV
ANQKMAGDLIITDHSLQNTTNTPKISDKVNKNTLVKYALAGRVGNIPNPVFTCERDGKVV
VSIIVDEAGRVTKTAIDRANSTTTDDCLLENSLLYAQKAKFNAVSGKKEQTGTITYIFQS
KR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgataactccagaagaattttcagaaggtcgtatcttgcttattgataaacccttacaa
tggtcgtcgtttcaagcggtgaacaaaatcaaatgggcaatactcaaacactataagctc
aagaaaataaagatagggcacgcaggaacattagacccgcttgcctctggtttattggtg
atttgtaccggtaaatttaccaaaaaaatcactgaaatacaagatgctgtaaaaacctat
acgggtactatcaccttgggagctactaccccttcctacgatatggaaaccgaaatagat
actcgctaccctactgaccatatcactcctgaactgatagaacaagtgcgaaaacagttt
atgggtgagcttgtgcaaaccccacctgtattttcggctataaaaaaagaaggcaaacgc
ctctacgaatttgctcgcgatggcaaagaaatagaagtacctcagcgcactatttacatt
cacaatttcactattgatgcaagtcagtttcctgagttgcactttgaggtggtatgtagt
aaaggcacttatatacgttctttagcaaaagattttggtaaagccttaggatcaggaggc
tatctatcggctttgcgacgcaccaaaataggtgatttttcagtaagtgatgccataagt
cctgaggagtttgtcagtactcatattcctgacctcaggaaacacccccttcctcctatt
attcttactactgtggtaggtgaaccacaagaaaataaagttctcaacgaccgttttgcc
aatcgcaataaaaccatcaacagtcagtttgaacgtgaagaaacacctccctcccaccct
actggcgagttgaatatggaggctatatttccaagacgaaaagctcaaaaaacttctggg
ttacagtatgaattacgcgcttttatgcgaatgttcactaatactgataaggcaattact
atcactttgctcatactcttctgtactgtactcacccttatggtaatacaattgaacgac
aagaagaaagaaataatgatagaaatggcacttacccctgatgatttacctcaagagccc
ccacaacctgaagaaacctctcctaatgccgatattcctactaacaataccaaactcact
accaatgcttacaaccaagcagatgcttccttacaacacactgatgatttcaaaacttta
gacgaaattatggctgaacgtgctgctcaggaaatggcagctgccaaagaagaattagta
gccaaccaaaaaatggcaggcgacctcattatcaccgatcacagtttgcaaaacacaact
aatactcctaaaataagtgacaaagtcaataaaaatactttagtaaaatacgccttagct
ggtagagtaggaaatattccgaatcctgtgtttacttgtgaacgtgatggaaaagtggtg
gtaagtatcattgtggacgaagcagggcgtgtgactaaaacagctattgatagagctaat
tccacaactaccgatgattgtttattagaaaactcattactctacgctcaaaaagctaaa
ttcaatgcggtgagtggcaaaaaagaacaaacaggcactattacttatatttttcagagc
aaaagataa
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