Capnocytophaga endodontalis: CBG49_11455
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Entry
CBG49_11455 CDS
T04940
Name
(GenBank) ATP-dependent exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
capn
Capnocytophaga endodontalis
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capn03400
]
CBG49_11455
DNA repair and recombination proteins [BR:
capn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBG49_11455
Archaeal homologous recombinant proteins
CBG49_11455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
SMC_N
MukB
FtsK_SpoIIIE
DIRP
Motif
Other DBs
NCBI-ProteinID:
ASF43645
UniProt:
A0A1Z4BQS2
LinkDB
All DBs
Position
complement(2532546..2536097)
Genome browser
AA seq
1183 aa
AA seq
DB search
MKILSVSLHNIASIEGPFTLNLEAKPLKSVGLFAITGATGAGKSTILDAICLALYNDTPR
LAATQSSVAITDSGVEVKANNVKHLLRKGAVSGYAKVVFQAVDGKIYEAEWQVSRAYNKP
SGAIQNEKMQLTCLTDNHLIAENRKTLVLEKIRECVGLTFDEFTKSVILAQGDFTSFLKA
NDDKRSDILEKLTGTEIYTRVSKQIHECYKQHKNELQLLEKQLENIVFLTEDERTTLSTQ
LAADEAQLNNLQSSLTALRAQQQWFDNQKLYTQQWQEALENKQIAEQEKISQSERFAQLA
MVEQLQAVKGDILTQQKESEKLALTIQQLEQATLEKEQLTTDKALISSDKETIEKDLTTA
KKTFEKAKPAIAKAKELDIRLTEQQNALLQHQQQYNTKKSVLQTKETELEKVVEHIQKGE
SYIQTEEQWFNTHPDEAQLYRNALWLEQLATDQQLLNEKLTAYKQTEERLTQQLSNLKAQ
HAIENLPSIDVEALAKQQKDYLTALQMYQSDREVAKRMMQYEAQKIQGESLLQELQHTQD
QTEEAITQLQTAQAEAKITCDTAERIYQKTQIENTKDVAFLREHLVEGEACPVCGALHHP
NAHKAVAEHLINTVHQEFLTAKKHLESLTKDLITKETELKELQKRIAQQTTQNAEYATLY
NQEYEHLTQSVYYYMAYPTAEIDPYITCKISEIEHLLAETETLFEVLNQLKSLTDELNTL
AKDTQNCEQQSQKYFQQLQNLQLSVAWLNLWQTDIAQFQKQVVTAKTDWETHSACLEKYK
KRLAELTQERTELSSSAQVLQQELTELTERITKEQIQLQKMKEERNNLLEGKSAQEVEAT
FEKQINELTSRLEQNQQQYNAILLKLTANEKTLETLITQQQQSQTHITEATLTIEEWLTA
YPSEQIEFIRRKMLEWANHSHEWLQSERQALQSLNERIAQYNTIATEKQHALEQLKEKRP
LDLTEEATIQQLVAQTAEEDTLREAVVTQKSRLLTDSQQRATAATLHIAKEEKEKLTHRW
SLLNDLIGSSTGNTFRKYAQEYTLDMLLQYANVQMRYLNRRYTLQRIPNSLSLQVVDNDM
GAEVRSVYSLSGGESFLVSLALALALSSLSSTKMNVETLFIDEGFGSLDSETLSVAIDAL
ESLQNQGKKVGVISHVQEMVERIAVKVVVQKKGNGKSSIVVTV
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactctccgtctctctccataatattgcctctatcgaaggcccttttactctc
aatttggaagctaaacctctcaaatcggtggggttattcgctattacgggggctacaggt
gcaggaaaatctactattttagatgctatttgcctcgccctttacaacgatactcctcga
ttggctgctacccagagttccgttgctattaccgatagtggggtagaggtaaaggctaac
aacgtgaaacacctcttgcgcaaaggggctgtttcgggctatgccaaagtggtatttcag
gcggttgatggcaagatttacgaagccgaatggcaggtgagtcgcgcttacaacaaaccc
tcgggggctatccaaaacgagaaaatgcaactcacttgcttaactgataaccacttaatt
gccgaaaatcgcaaaacactcgtactcgaaaagattcgcgaatgcgtagggttaactttt
gatgagtttactaaatcggtgattttagcacaaggcgattttacttctttcttaaaagca
aacgacgataaacgttcggatattttagagaaactcacaggtactgagatttatacacgc
gtttctaaacagatacacgaatgttataaacaacacaaaaacgaacttcaactcttagaa
aaacagcttgaaaatatcgttttcttaacggaagatgaacgcacaacgctatctactcaa
ctcgctgctgatgaagctcaattaaacaatttgcagtcgtcgcttactgccttaagagct
caacaacagtggtttgacaatcagaaattgtacacacaacaatggcaagaggctcttgaa
aataaacaaatagccgagcaggaaaaaatctctcagtcagaacgttttgctcagcttgct
atggtggagcagttgcaagctgtaaaaggggatatcctcacccagcaaaaggaaagcgaa
aaattagcactcaccatacaacaattagagcaagctactttagaaaaagaacaacttact
accgataaggctcttatttccagtgataaagagactattgaaaaggatttgacaacagcc
aaaaaaacttttgaaaaagccaaacctgctatcgctaaagcaaaggaactggatattcgt
ctcacagaacaacaaaatgcgctattgcaacatcagcaacagtacaacactaaaaaatct
gttttacaaactaaagaaacggaacttgaaaaagtagtggaacatatccaaaaaggggag
agttacattcaaacagaagaacaatggttcaatactcaccccgatgaggctcaattgtac
cgcaatgcgctgtggttagagcaactcgcaaccgaccagcaactgctcaacgaaaaacta
actgcctacaagcaaacggaagaacgccttacacaacaactctctaacctgaaagctcaa
cacgctattgaaaatctcccctcaatagatgtagaggctcttgctaaacaacaaaaggat
tatctcaccgctttgcaaatgtatcaatcggatagagaagtggcaaaacgaatgatgcaa
tatgaagcacagaaaatacaaggagaatcactcttacaagagttgcaacatacacaagat
caaacggaagaggctataacacaattgcaaacagctcaggcagaagccaaaattacttgt
gacactgctgagcgtatctaccaaaaaacacaaatagaaaataccaaagatgtagcgttt
ttgcgtgaacatttggtggagggagaggcttgtcctgtatgtggggcgctacaccacccc
aatgctcacaaggctgtcgccgaacatcttatcaatacggtacatcaagaatttctcact
gccaaaaagcatttagagtcgcttacgaaagacttaattaccaaagaaacagagcttaaa
gaactgcaaaaacgcatagcacagcaaaccacacaaaatgctgaatacgcgacattatac
aaccaagagtacgagcacttaacacaatcggtgtattattatatggcttatcccactgct
gaaatagatccttatatcacatgtaaaatttctgaaatagagcatcttttagcagaaact
gaaacgctttttgaagtgcttaaccaactcaaatcactcaccgatgagctgaatactctt
gcaaaagacactcagaattgtgaacaacaaagccagaaatattttcaacagttgcaaaat
ttgcaactttcggttgcttggctcaatctttggcaaacagatattgcacaatttcaaaaa
caggttgttacagctaaaaccgattgggaaacacattcggcttgtctcgaaaaatacaaa
aaacgccttgcagaactcacgcaagagcgtacagagctttcttcttcggctcaagtgctc
cagcaagaactcactgaactgacggagcgtattacaaaagagcaaattcagttgcaaaaa
atgaaagaagaacgtaacaatttgttagaaggaaaatcggctcaagaggtagaggctact
tttgagaaacaaataaatgaattaacatctcgattagagcaaaaccaacagcaatacaat
gctattttgctaaaactgacagctaatgaaaagactttagaaaccttaataacgcaacaa
cagcaatcgcaaactcatataactgaggcgactcttacaatagaagaatggcttactgct
tacccttctgagcaaatagagtttataagaagaaagatgctagagtgggcaaatcactct
cacgaatggctacaatcagaaaggcaagcccttcaatcgttaaacgagcgcatagcccaa
tacaatactattgctacagaaaaacaacatgctcttgaacaattaaaagaaaaacgacca
cttgaccttacagaagaagctaccatacagcaattggtagctcaaacagctgaagaagat
acattacgtgaggctgtagttactcaaaaaagtaggcttttaactgatagtcagcagcgt
gctaccgctgcaacattgcatatagctaaagaagaaaaggaaaaactcacccatcgctgg
agtttgctcaacgaccttataggaagtagtacaggtaacacattccgtaagtatgctcag
gaatatactcttgatatgctcttgcaatacgccaatgtgcaaatgcgctatctcaatagg
cgttatactttgcaacgcattcctaattctttaagtttgcaggtggtagataacgatatg
ggtgctgaggtgcgttcggtttattcactttcaggaggagaatcatttttagtatctctg
gctttggctttggcactttcctcactctcatctactaaaatgaatgtagaaaccctcttt
atagacgaaggttttggctccttagactccgaaacgctttctgtagccatagatgcattg
gaaagcctacaaaatcaagggaaaaaagtaggggttatctctcatgtacaagaaatggta
gagcgcattgctgtgaaagtagtagtacaaaagaaaggcaatggaaagagcagtatagtt
gttactgtttag
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