Capnocytophaga endodontalis: CBG49_11925
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Entry
CBG49_11925 CDS
T04940
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
capn
Capnocytophaga endodontalis
Pathway
capn00260
Glycine, serine and threonine metabolism
capn00460
Cyanoamino acid metabolism
capn00630
Glyoxylate and dicarboxylate metabolism
capn00670
One carbon pool by folate
capn00680
Methane metabolism
capn01100
Metabolic pathways
capn01110
Biosynthesis of secondary metabolites
capn01120
Microbial metabolism in diverse environments
capn01200
Carbon metabolism
capn01230
Biosynthesis of amino acids
capn01240
Biosynthesis of cofactors
capn04981
Folate transport and metabolism
Module
capn_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CBG49_11925 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CBG49_11925 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CBG49_11925 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CBG49_11925 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CBG49_11925 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CBG49_11925 (glyA)
Enzymes [BR:
capn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CBG49_11925 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ASF44548
UniProt:
A0A1Z4BTF6
LinkDB
All DBs
Position
complement(2635918..2637192)
Genome browser
AA seq
424 aa
AA seq
DB search
MQRDIDIFELIEDERERQELGIELIASENFVSDQVMEAAGSVLTNKYAEGYPGKRYYGGC
EVIDEIEQIAIDRAKALFGAEYANVQPHSGSQANAAVYATCLKPGDKILGFDLSHGGHLT
HGSPVNFSGRLYEPVFYGVEKETGRLNYDNILEIAKRERPKMIVAGASAYSRDIDFKRFR
EIADEVGAILFADIAHPAGLIAKGLLNDPIPHCHIVTTTTHKTLRGPRGGLILMGKDFEN
PFGIKTPKGEVRMMSSLLDSAVFPGNQGGPLEHIIAAKAVAFGEALSDDFLYYAIQVQKN
ARKLATILLDKGYDIISKGTDNHLMLIDLRNKNVSGKEAEEALGKADITVNKNMVPFDTR
SPFVTSGIRVGVSAITTRGLKEADMEHIADFIDRAITNRENEEILEEIAAEVNKFMEDRP
LFAY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagagacattgatatttttgaactaattgaggacgagagagagcgccaagagttg
ggaatagaactcatcgcctccgaaaactttgtaagcgaccaagtaatggaagcagcaggt
tctgtacttactaacaaatacgccgaaggttatcccggcaagcgttactacggtggttgt
gaagtgattgacgaaatcgaacaaatagctattgatcgcgctaaagccctttttggcgct
gaatatgctaatgtacagcctcatagcggttcacaagccaatgccgctgtatatgccact
tgtctcaaaccaggtgataaaattctcggcttcgacctctctcacggtggtcaccttact
cacggatctcctgtaaatttctcaggtagattgtacgaacctgtattctatggcgtagaa
aaagaaacaggccgactcaattacgacaatatattggaaatagctaaacgtgaacgtcca
aaaatgatagtggcaggcgcctcagcctactctcgtgatatcgactttaaacgttttaga
gaaatagccgatgaagtaggagctatcctctttgccgatattgctcaccccgcagggctt
atcgctaaaggtttgttgaacgacccaatccctcattgccatatcgtaaccactactacc
cacaaaaccctacgtggtcctcgcggcgggctcatcttaatgggtaaagattttgaaaac
cctttcggtatcaaaactcctaaaggcgaagtacgaatgatgagctctttacttgatagc
gcagtattcccaggaaaccaaggcggacctttagaacacatcattgctgctaaagctgta
gctttcggcgaagccctctccgatgatttcctctattatgccattcaagtacagaaaaat
gctcgtaagttagcaactattcttttagataaaggatatgatatcatctctaaagggact
gacaatcacctaatgcttattgatttgcgtaataaaaacgtaagcggtaaagaagccgaa
gaagctcttggaaaagccgatattacagtaaacaaaaatatggtgccttttgatacccgt
tctccttttgtaaccagtggtattagagtaggtgtatctgccattactactcgtggactc
aaagaagcggatatggaacacattgccgactttatagatcgtgctatcactaaccgtgaa
aatgaagaaatacttgaagaaatagctgctgaagtaaacaaatttatggaagatagacct
ctgtttgcttactaa
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