Capnocytophaga endodontalis: CBG49_12600
Help
Entry
CBG49_12600 CDS
T04940
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
capn
Capnocytophaga endodontalis
Pathway
capn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBG49_12600 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
capn01007
]
CBG49_12600 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
capn03016
]
CBG49_12600 (lysS)
Enzymes [BR:
capn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CBG49_12600 (lysS)
Amino acid related enzymes [BR:
capn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CBG49_12600 (lysS)
Transfer RNA biogenesis [BR:
capn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CBG49_12600 (lysS)
Prokaryotic type
Other AARSs
CBG49_12600 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ASF43850
UniProt:
A0A1Z4BRF3
LinkDB
All DBs
Position
complement(2794292..2795980)
Genome browser
AA seq
562 aa
AA seq
DB search
MLSEQEIIRREKLSKLKELGINPYPAPLYPVDTTSKDVADRYEEGKQVVVAGRLMSLRVQ
GKASFATLQDSEGTMQLYFNRDEMCPGEDKTLYNEVFKKLLDLGDFIGVEGYLFITKMGE
KTVAVKNFTLLSKVLRPLPMPKVDADGKVHDAFTDPEQRYRMRYVDLVVNPQVKEVFIKR
TKLFNAMRHFFNEAGYLEVETPILQAIPGGASARPFITHHNALDIPLYMRIANELYLKRL
IVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYHWMMNFTERLIEHCAMAVNG
TTKATFGAHTVDFKAPYPRITMTEAIKQFTGFDITGKTEEELRTFAHSIGIAVDETMGKG
KLIDEIFGEKCEGNFIQPTFITDYPKEMSPLTKEHRDNPALTERFELMVCGKEIANAYSE
LNDPIDQRERFEEQLRLSEKGDDEAMFIDQDFLRALEYGMPPTSGLGIGMDRLIMFLTNN
ESIQEVLFFPQMRPEKKGVELSEDEKVVFELLKTSEKLLLDALKTQTAFSNKKWDKAIKG
LTSKKVAKVVKEGEELFVELAN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgttatcagaacaagaaatcattcgtagagaaaaactctctaaattgaaagaattaggg
attaatccatatcccgctccattatatcctgtcgatactacctctaaggatgtagccgac
cgttatgaagaaggtaagcaagtagtggttgctggtaggttgatgtccttgcgcgtacaa
ggaaaagcctcgtttgctactttgcaagacagcgagggcacaatgcagttgtatttcaat
cgcgatgagatgtgcccaggggaagacaaaacgctctacaatgaggtgtttaaaaaactc
ctcgatttaggcgactttataggggtagaaggttatttattcatcaccaagatgggtgaa
aaaacagtagccgttaagaattttaccctcttatctaaagtattgcgccctctaccaatg
cccaaagtagatgccgatggcaaagtgcacgatgcctttaccgaccctgaacaacgctac
cgtatgcgctatgtagatttggtagtaaatccccaagtgaaagaggtatttatcaaacgt
acaaagctgttcaatgcgatgcgccacttttttaatgaggcaggttatttggaagtagaa
acacctatattgcaagctatcccagggggagctagtgcgcgtccgtttatcactcaccac
aatgcgttggacattccgctctatatgcgtattgccaatgaactctatctaaaacgtctt
attgtgggtggttttgatggagtgtatgagttttctaaaaacttccgtaacgagggaatg
gatagaactcataacccagaatttactgcgatggaaatctatgtggcttataaagattac
cactggatgatgaacttcaccgagcgtttgatcgaacattgcgctatggcagtaaatggt
actactaaggctacttttggggctcatacagtagatttcaaagctccctatcctcgtatt
acgatgaccgaggctatcaaacagtttacaggttttgatatcacagggaaaacagaagaa
gaattaagaacttttgcacattctattggtattgcagtagatgaaacaatgggcaaaggc
aagcttatagatgagatattcggcgagaaatgcgaaggcaactttattcagcctactttc
atcaccgattatcctaaagagatgtcccctcttaccaaagaacaccgtgacaatcctgca
cttactgagcgttttgaactaatggtatgtggtaaagagattgctaatgcctactctgag
ctcaacgaccctatcgaccagcgagagcgctttgaagagcaattgcgactctcagaaaaa
ggtgatgatgaggctatgttcatcgaccaagatttcttgcgcgctcttgaatatggtatg
ccacctacctcaggtttaggtatcggtatggatagattgattatgtttctaaccaataat
gagagcatacaagaagtgcttttcttcccacaaatgcgtcctgaaaagaaaggcgtagaa
ctatcagaagatgaaaaagtagtatttgaactactaaaaacatcagaaaaacttctttta
gatgctcttaaaacacaaactgctttctctaacaagaaatgggataaagctatcaaagga
cttactagcaagaaagttgctaaagtagtaaaagaaggagaagaactgttcgtagaatta
gcaaattag
DBGET
integrated database retrieval system
