Capnocytophaga endodontalis: CBG49_12865
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Entry
CBG49_12865 CDS
T04940
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
capn
Capnocytophaga endodontalis
Pathway
capn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CBG49_12865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capn03400
]
CBG49_12865
Enzymes [BR:
capn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBG49_12865
DNA repair and recombination proteins [BR:
capn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBG49_12865
RecFOR pathway proteins
CBG49_12865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
TIP49
AAA_16
AAA_14
nSTAND3
Rad17
AAA_33
RNA_helicase
TsaE
AAA_18
NACHT
AAA_PrkA
NB-ARC
AAA_28
Sigma54_activ_2
AAA_17
ABC_tran
NPHP3_N
AAA_24
Torsin
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ASF43900
UniProt:
A0A1Z4BRK2
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All DBs
Position
2865334..2866359
Genome browser
AA seq
341 aa
AA seq
DB search
MNKNLDPNKENYSAQELDIERALRPLSFDDFAGQEAVLENLKIFVKAANMRHEALDHTLF
HGPPGLGKTTLAHILANELGVGIKITSGPVLDKPGDLAGLLTNLQERDVLFIDEIHRLSP
VVEEYLYSAMEDYKIDIMIESGPNARTVQINLNPFTLIGATTRSGLLTAPMRARFGIQSR
LQYYSTELLADIVQRSASILKVPISMEAAIELASRSRGTPRIANALLRRIRDFAQIKGNG
KIDIAITRFGLKALNVDAHGLDEMDNKILSTLIDKFKGGPVGITTLATAVSESAETIEEV
YEPFLIQEGFIVRTPRGREVTELAYKHLGKVHPAKQGTLFD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaaacttagatccaaataaagaaaattattcggcgcaagaactcgatatagaa
agagccttgcgccctttgtcgtttgatgattttgcggggcaagaagcagttttagaaaac
ctaaaaatattcgtaaaagctgctaatatgcgccacgaagctctcgatcatacccttttt
cacggccctccaggacttggaaaaactactctcgctcatattttggctaacgaattgggt
gtaggtatcaaaattacttcaggtcctgtgcttgataaacctggagatttagctggatta
ctcactaatttgcaagagcgcgatgtactttttatcgacgagatacaccgcttgagtcca
gtagtagaagagtatctttactcagctatggaagactacaagattgatataatgatagaa
tcaggccccaacgctcgcaccgtgcaaatcaacctcaatccctttacacttataggagca
accacccgttcaggtttacttacagctcctatgcgtgcacgttttggtattcaaagtcga
ttgcaatattattctactgaacttttagcagatatcgttcagcgtagtgcttctattctc
aaagtcccaatttctatggaagctgctatcgaattagcaagcagaagtagaggtaccccg
cgtattgctaatgcccttttacgtcgtattcgcgacttcgcgcaaataaagggcaatggt
aaaatagatatcgctattacccgctttgggctcaaagccctcaatgtagatgcacacgga
ttagacgagatggacaacaaaatcctctccaccctcatcgataaatttaaaggaggcccc
gtaggaatcactactttagcaactgccgtctccgaaagcgccgaaactattgaagaagtc
tatgagcctttcctcattcaagaaggttttattgtacgtacccctcgcggtagagaagta
accgagttagcttacaaacacttaggaaaagttcatcccgcaaaacaaggaacacttttc
gactga
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