Capnocytophaga sp. oral taxon 902: HW278_00415
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Entry
HW278_00415 CDS
T08773
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
capo
Capnocytophaga sp. oral taxon 902
Pathway
capo02024
Quorum sensing
capo03060
Protein export
capo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
capo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HW278_00415 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HW278_00415 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HW278_00415 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
capo02044
]
HW278_00415 (ffh)
Enzymes [BR:
capo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HW278_00415 (ffh)
Secretion system [BR:
capo02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HW278_00415 (ffh)
Eukaryotic Sec-SRP protein
HW278_00415 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
cobW
CbiA
AAA_22
nSTAND3
CLP1_P
KAP_NTPase
APS_kinase
AAA_24
6PF2K
ATPase
AAA_33
KTI12
ResIII
NPHP3_N
AAA_16
AAA_18
AAA_31
TsaE
DO-GTPase1
ATP_bind_1
ArsA_ATPase
NACHT
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QLF49275
UniProt:
A0A7H8YNZ3
LinkDB
All DBs
Position
109239..110570
Genome browser
AA seq
443 aa
AA seq
DB search
MFDNLSDKLEKALHNLKGHGKITEINVAETLKEVRRALLDADVNYKIAKDFTNNVKEKAL
GQQVLTTLQPGQLMVKIVKDELTQLMGGDAAGVNLSGNPTIILMSGLQGSGKTTFSGKLA
NYLKNKRNKKPLLVACDVYRPAAIDQLHIVGEQVGVPVFSDKGNNNPVDIAKKGVQYAKE
NHLNVVIVDTAGRLAVDEQMMTEISNIHKALNPQETLFVVDAMTGQDAVNTAKAFNDVLN
FDGVILTKLDGDTRGGAAITIKSVVNKPIKFVGTGEKMDAIDVFYPDRMADRILGMGDVV
SLVERAQEQFDEEQARKLQKKIAKNQFGFDDFLEQIQQIKRMGSMKDLLGMLPGVGKAVK
DLDIKDDAFKHIEAIIHSMTPKERNTPAIIDLNRKKRIAKGSGRDIQEVNQLMKQFEQMS
KMMKMMQGGGSRKMMQMMQGMRG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaagtgataaattagagaaagccctacataacttaaagggacacggt
aaaattaccgaaataaacgtagctgaaacactgaaagaagtgcgtcgcgctttgcttgat
gccgacgtaaattataagatagccaaagattttaccaataacgtaaaagaaaaagcctta
ggacaacaagtgctcactaccctacaaccagggcagttaatggtgaagattgtaaaagat
gagctcacccagctaatgggaggtgatgctgctggagtgaacctatcggggaatcctact
attatattgatgtcggggttacaaggttctggtaagactactttctcaggaaaattggct
aactacctcaaaaataaaagaaataaaaaaccattgctcgtagcgtgtgacgtgtatcgt
cctgctgcgatagaccaattacatattgtaggagaacaggtgggggtacctgttttttcg
gataaagggaacaataaccctgtggatattgccaaaaaaggggtgcaatacgccaaagaa
aaccacttgaacgtggtgattgtggataccgcaggtcggttggcagtagacgagcaaatg
atgaccgaaatatcgaatatccacaaagcactgaacccacaagaaaccctttttgtagta
gatgcgatgacggggcaagatgctgtaaacacggctaaagccttcaacgatgtgctcaac
ttcgatggggttatccttaccaaactcgacggggacacccgcggtggggcggctatcact
attaaatcggtagtgaataaacctatcaaattcgtaggtacgggcgagaaaatggacgct
attgatgtgttttatcccgaccgtatggctgaccgtatcctcggtatgggggacgtggta
tcattagtagaacgcgctcaagagcagtttgacgaagagcaagcgcgcaaattgcaaaag
aaaattgcaaaaaaccaatttgggtttgacgactttcttgaacaaatacagcaaattaag
cgtatgggtagtatgaaagacctccttggtatgcttcccggtgtgggcaaagcagtgaaa
gacctcgatatcaaagacgacgctttcaagcatatcgaagcaattatccattcgatgact
ccaaaagagcgcaatacgcctgctatcatagatttaaaccgaaaaaaacgaattgccaaa
ggtagcggtcgagatattcaagaggtaaaccaactaatgaaacagtttgagcaaatgagt
aagatgatgaaaatgatgcaaggtggcggtagcagaaagatgatgcagatgatgcaggga
atgagaggttag
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