Capnocytophaga sp. oral taxon 902: HW278_00555
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Entry
HW278_00555 CDS
T08773
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
capo
Capnocytophaga sp. oral taxon 902
Pathway
capo03420
Nucleotide excision repair
capo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
capo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HW278_00555
03430 Mismatch repair
HW278_00555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capo03400
]
HW278_00555
Enzymes [BR:
capo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HW278_00555
DNA repair and recombination proteins [BR:
capo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HW278_00555
MMR (mismatch excision repair)
Other MMR factors
HW278_00555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QLF49301
UniProt:
A0A7H8YSC7
LinkDB
All DBs
Position
142580..144949
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AA seq
789 aa
AA seq
DB search
MDTFLKELESLNAPQRAAVLQKDGPIIVIAGAGSGKTRVLTYRIANLMREGVDAFNILAL
TFTNKAANEMKKRIASLVGNNEAKNLWMGTFHSVFAKILRIEADKLGYPQNFTIYDTQDS
QRLINGIIKEMELDKDIYKYKRIQSRISSFKNSLITVRAYFNNPELMEADAMARQPRLGE
IYQEYVDRCFKAGAMDFDDLLLKTNELLNLYPDVLAKYQNRFRYILVDEYQDTNHSQYLI
VKALADRFHNICVVGDDAQSIYAFRGANINNILNFKNDYPEAKEYKLEQNYRSTKNIVEA
ANSVIEHNKIRLEKVVFTENELGEPIKVHRSPTDADEGRFVASSIFENKMQYQLPNGNFA
VLYRTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDMLAYLRLIINPNDEEALVRII
NFPARGIGETTMEKLTLAANHYKKSIFEIMYNINKLPELHINTTTKQKLTDFVVMILNFQ
ALNQKANAFEVAEQVAKKTGLLQEFKKDGTPEGIAKMENIEEMLNGMKDFVEGQEDVADS
RASLSEYLEDVALATDMDKEIGDDDRVALMTIHLAKGLEFPYVYVVGMEEDLFPSAMSIQ
SRNDLEEERRLFYVALTRAEKQAYLTYAENRYRWGKLSDAEPSRFIEEIDERYLQYLTPS
ISNPNYRYKPLIDRDIFGEVDKSKLRLQKPISGIPPHKNAPTGEEQQKLRKLKPVNALYN
SDSNNKNTYNGLDIGTVVYHERFGRGKVISLEGAGNDKKAQINFETGGLKNILLRFAKLT
IIDSLNEDL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggatacatttttaaaggaattagaaagtctaaatgcccctcaacgtgctgccgtgctt
caaaaagatggacctatcatcgtgatagcaggagcaggctctggtaaaactcgcgtgctt
acttatcgtatagccaacttgatgcgagaaggagtagatgctttcaatatccttgctctt
acctttactaataaggctgccaacgaaatgaaaaagcgtattgccagtcttgtaggcaac
aacgaagcaaagaacctatggatgggtacattccactctgtttttgctaaaatcttgcgc
atcgaagccgataaattgggatatcctcaaaattttactatatatgacactcaagactct
cagcgccttattaatggtatcattaaagagatggagttggacaaggatatctataagtat
aaacgaatacaatcgcgtatttcttcctttaaaaacagtcttattacggtgagagcctat
tttaataatcctgaactgatggaagctgatgcaatggcaagacaaccacgtttaggagaa
atttatcaagaatatgtagataggtgttttaaagcaggagcaatggattttgacgattta
ctgctgaaaacaaatgaactcctcaatctatatcctgatgtattggcaaaatatcaaaat
aggtttaggtatattcttgtagatgagtatcaagataccaatcactctcaatatcttatc
gtgaaggctttggctgaccgttttcataacatttgtgtagtaggagatgatgcgcaaagt
atttatgcttttaggggagcaaacatcaataatattctcaatttcaaaaatgattatcca
gaagcaaaagaatataagttagagcaaaattatcgttctacaaaaaacattgtggaagca
gctaatagtgtgatagaacacaataaaatacgattggaaaaggtagttttcactgaaaat
gaattaggtgaacctattaaagtgcatagaagtcctactgatgctgatgaaggtcgtttt
gtagcgagctctatcttcgaaaacaagatgcaataccagctccctaatggtaattttgcg
gtactttatcgtactaactcacaatcgcgtgctattgaagatgcccttagaaaacgtgat
attccatatcgcatctatggcggattgtcattctaccagcgtaaggaaatcaaagatatg
cttgcttatttgagacttattatcaatccaaatgatgaggaagctttggtgcgcattatc
aattttcctgcacgaggtattggagaaactacaatggaaaagcttactttggcagcaaat
cattataagaagtctatcttcgagataatgtataacatcaataaacttccagaactgcac
atcaatactactacaaagcaaaaacttactgattttgtggtaatgattcttaactttcaa
gctctcaatcaaaaagcaaatgcttttgaagttgccgaacaagtcgcaaagaaaacaggg
cttttgcaagagtttaaaaaagatggtactcccgagggtatagccaaaatggaaaacatc
gaagagatgcttaatggtatgaaagattttgtagaaggacaagaagatgtagcagatagc
agggcaagtctttcagaatatttagaagatgttgctttggctactgatatggataaagag
ataggtgatgatgaccgtgtagctttgatgactattcacttggcaaaaggattggagttt
ccgtatgtatacgtggtaggaatggaagaagatttgtttccttcggcaatgagcatacaa
tcgcgtaatgatttggaagaagaaagaaggttattttatgtagcactcacccgtgctgag
aaacaagcctatttaacttatgcagaaaaccgttatcgttggggaaaactttctgatgcc
gagccaagtagatttatcgaagaaatagatgaacgctatttgcagtatcttacaccttct
atttctaatcctaattatcgatataaaccacttattgatagggatatttttggtgaagta
gataaaagtaaactacgtttgcagaaacctataagtggaatacctcctcataaaaacgcc
ccaacaggagaagaacaacaaaaactcaggaagttaaaacctgtgaatgctttgtataat
tctgatagtaataataaaaatacttataacggactggatataggaacagtagtttatcac
gaacgtttcggtcgtggtaaagtaatttcattggaaggagcaggaaatgataaaaaggcg
caaataaatttcgagacaggaggcttaaaaaatatattattacgctttgctaaactaact
attattgatagtttgaacgaagatttataa
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