Capnocytophaga sp. oral taxon 902: HW278_03135
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Entry
HW278_03135 CDS
T08773
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
capo
Capnocytophaga sp. oral taxon 902
Pathway
capo03030
DNA replication
capo03430
Mismatch repair
capo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HW278_03135 (dnaE)
03430 Mismatch repair
HW278_03135 (dnaE)
03440 Homologous recombination
HW278_03135 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capo03032
]
HW278_03135 (dnaE)
03400 DNA repair and recombination proteins [BR:
capo03400
]
HW278_03135 (dnaE)
Enzymes [BR:
capo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HW278_03135 (dnaE)
DNA replication proteins [BR:
capo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HW278_03135 (dnaE)
DNA repair and recombination proteins [BR:
capo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HW278_03135 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
DUF655
HHH_3
MCM10_OB
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
QLF49764
UniProt:
A0A7H8YRY1
LinkDB
All DBs
Position
complement(747983..752440)
Genome browser
AA seq
1485 aa
AA seq
DB search
MYLIFDTETTGLPRRWDAPLTDSDNWPRAVQIAWQLHDEWGTLIEHQDFLIKPDGFDVPY
DAEKVHGISTQLAEAQGVPIAEVFKAFNEALSKAQYVVGQNIGFDINIMGAEFYRYGVES
PLTQMPVIDTCTEATANLCQIAGGKGGRYKLPTLTELHSFLFGVPFAEAHNATADVEATT
RCFFELIRRGEGFQEGTFSSDYIKEFQGHHTSPIGLIGLKHVNLKEASDALRKSSSTAQT
TESHADASLLENAVFAHLHNHTQHSILQSTTSIKDLVKITAKEKMPAVALTDSGNMMAAF
HFVQAVQGHNKEAEAKNKEAQEKGETPTETLIKPIIGCEFNICENHLDKTRQDNGYQVVI
LAKNKQGYHNLTKMASIASTKGFYYVPRIDKAIVEQYKSDLMVLSGGMNGEIPSKILNIG
TKQAEEALLWWKEQFGDDFYLEVMRHNQEDENRVNETLVEFSKKYGVKLIATNNTFYLHK
KDANAHDILLCVKDGEKQKTPIGRGRGYRFGMPNNEYYFKTSAEMKALFKDIPEAILNIQ
EIIDKVEPYGLARDILLPKFDIPEEFQVEDDPTGKKGENNYLRHLTYEGAKRKYPEITDE
VRERLDFELSIIEKTGYPGYFLIVQDFIAAARRMNVSVGPGRGSAAGSAVAFCLDITNMD
PIKYDLLFERFLNPDRVSMPDIDIDFEDSGRQDVINYVIDKYGESQVARIITYGKMAAKS
AIKDTARVLDVPLQESNRLAGLVPNGVSSLGKMFGWDDKTLKEKVRSEELPKVDELKRLL
AGEGEEESTQTIQQANIIEGSVRNTGIHACGVIITPDDITNFVPVALAKDSDLFVTQFDN
SVVESAGLLKMDFLGLSTLTLIKDTIENIKQTHNIELDAEAFPLDDKKTYELFQRGETVG
IFQYESTGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFIKRKHGIEPIEYDLPDME
EYLKETYGITVYQEQVMLLSQKLAGFTKGEADVLRKAMGKKQIAVLAKMKPKFITQASEK
GHDAQKLEKIWADWEKFAAYAFNKSHSTCYAWVGYQTAYLKANYPAEYMAAVLSNNMNDI
KTITFFLEECHRMGIKVLPPDVNESLYKFTVNKNGDIRFGMGAVKGVGKAAVDTIVEQRQ
ERPYTSIFDLAKRVDYKSINKKAFESIALAGGFDSFTNVHRAQYFHAEADGVPFLEKAIR
FGTKYQESKNSAQMSLFGGESEVDIPEPAVPKCETWGNLEQLRREKEVVGIYISGHPLDD
FKHELQNFCNISLSELQDLQPFINRELTVAGMVADLQHRTAKNGKGYGFFTLEDYDGSYE
FKLFGDDYLNYQKYMVPGAFLYIKFKVVEGFLNRETNQRGEPRIQFLQMMQLQDVMETLS
KKLTLHVNIEEINQDLIAKYKDLLQKHKGKQSIYFVVHHHNENIHLNMENGNLKVAITKS
FLDDLDALFAKYHLNDRRMEKIVAKKTEDTHDDEEMAMEDLGLSE
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatatttgatactgaaactacgggtttaccccgccgttgggatgcccccctt
accgatagtgacaactggcctcgcgccgtgcagattgcttggcaattgcacgatgagtgg
ggcacactcattgagcatcaggactttttgataaagcccgatggctttgatgtgccttat
gatgccgaaaaagtacacggtatttctacccaattagcagaagcacaaggagtgcctatc
gctgaggtgttcaaagcgttcaacgaggcgcttagcaaggcgcaatatgtggtgggacaa
aacatcggctttgatatcaatattatgggggctgagttttaccgctatggggtggagagt
ccgcttacgcagatgcctgtaatcgatacttgtactgaggcaactgccaacctctgccag
atagcaggcggaaaaggaggtcgttataagttgcccaccctcaccgagttgcactctttt
ctctttggcgtaccctttgccgaggcgcacaacgccactgccgacgtggaagcaactaca
cgctgtttctttgaattgatacgtcgtggcgaaggctttcaagaaggtactttcagtagc
gactatatcaaagaatttcaagggcatcacacctcacctatagggcttatcggactcaag
cacgtgaacctcaaagaggcttccgatgccttgcgaaaaagcagtagcactgcgcaaact
accgaatctcacgccgatgcttcattgttagaaaatgcggtgtttgcccatttgcacaac
catacgcaacactctatattacaatctactacgtctataaaagacctcgtaaaaatcacc
gcgaaagaaaagatgcctgccgtagcacttaccgatagtggcaatatgatggctgccttc
cactttgtgcaagccgtacaagggcataacaaagaagcggaagctaaaaacaaagaggct
caagaaaagggcgaaacccctaccgaaacgctcatcaagcctattataggttgtgagttc
aatatctgcgaaaatcacttagataaaacccgacaagacaacggctaccaagtggtgatt
ttagctaaaaacaaacaaggctatcacaatcttactaaaatggcttctatcgcttctacc
aaaggcttttactatgtgcctcgtatagataaggcgattgtagagcagtacaaaagcgat
ttaatggtactctcagggggtatgaatggcgaaattccttctaaaatactgaatattggt
accaagcaagctgaagaagcactcttgtggtggaaagagcagtttggcgacgacttctat
ctggaggtgatgcgccacaaccaagaagatgaaaaccgcgtaaacgaaacccttgtagag
ttttccaaaaaatacggggtgaaactcatcgctaccaacaataccttttatctccataaa
aaagatgccaatgcgcacgatattctgttgtgtgtgaaagatggcgaaaagcagaaaaca
cctatcgggcgcggtcgtggctatcgttttggaatgcctaacaacgagtattatttcaaa
acttcagctgaaatgaaggcgctcttcaaggatattcctgaggcgattcttaatattcaa
gaaattatcgacaaggtagaaccctatggcttggcacgtgatatcctcttgcctaagttt
gatatccccgaggaatttcaggtggaagacgaccctacaggcaaaaaaggggaaaacaac
tatttgcgtcatcttacttatgaaggggctaaacgcaaataccccgaaattactgatgaa
gtgcgggagcgtttggattttgagctttctattattgaaaaaacgggttacccaggttac
ttccttattgtgcaagactttatcgcagcagcgcgacgtatgaacgtatcagtaggacct
ggacgggggtcggcagcgggttcggcagtggcgttttgtttggatattaccaatatggac
ccaattaagtacgatctcctctttgagcgttttctaaaccccgaccgtgtgtcaatgccc
gatattgatatcgactttgaggactcgggtcgccaagatgtaatcaattatgtgattgat
aagtatggcgagagtcaggttgcacggattatcacctatggtaaaatggccgctaaatcg
gctatcaaagatacggctcgcgtgctggatgtacctctacaagagtcgaatagattagcg
ggcttagtgcctaatggggtgtcatctttagggaagatgttcggttgggacgataaaacc
ctcaaagaaaaagtgcgcagtgaagaactgccaaaagtagacgaactgaaacgcctttta
gcaggagaaggggaggaggagagtacccaaaccattcagcaggcaaatattattgaaggt
tcggtgcgcaacacgggtatccacgcttgtggggtaattatcacccccgatgatatcacc
aactttgtgccggtagctttagccaaagattccgacctatttgtgactcagttcgataac
tcggtagtagagagcgcagggttgctgaaaatggacttcttggggctcagtaccctcaca
cttatcaaagatactattgaaaatatcaaacaaacgcataatatagagctcgatgcagag
gcttttccgctcgacgataaaaagacttacgaactcttccagcgcggtgaaacggtcggg
attttccagtacgagtccactggtatgcagaaatatatgcgagagcttaaacctacggtc
tttgccgaccttatcgcgatgaatgctctttatcgtccaggtcctttggagtacattcct
agttttatcaagcggaaacacggtattgagcctattgagtacgatctccccgatatggag
gaatacctcaaagagacttatgggattaccgtttatcaagagcaggtgatgttgctatcg
cagaaattggcaggttttaccaaaggtgaagccgacgtgctccgtaaggcaatgggtaag
aaacaaatagccgtgctagccaagatgaagcctaagttcattacccaagcctccgaaaaa
ggtcacgacgcccaaaaactcgaaaagatatgggcagactgggagaagtttgccgcttat
gcgttcaacaaatcgcactccacctgctatgcttgggtgggttaccaaacggcttatctc
aaagccaattatcctgccgagtatatggcagcggtactctctaacaatatgaacgatatc
aaaacgattactttcttcttagaagagtgtcaccgaatgggtatcaaggtgttacctcct
gatgtgaatgaatcgttgtacaaatttaccgtaaataaaaacggtgatatacgcttcgga
atgggggctgtgaaaggagtaggaaaagcagcagtcgatacgattgtagaacaacgccaa
gaacgtccttatacctctattttcgatttggcaaaacgcgtagattataagagcatcaac
aaaaaagcctttgaaagtatcgctttggcaggaggttttgattcgttcactaatgtacac
cgtgctcagtacttccacgccgaagctgacggcgttccctttctcgaaaaagctattcgc
tttggtactaaataccaagagagtaagaattccgcccaaatgagtctgtttggtggtgag
agtgaagtagatatccctgaacctgctgtacctaaatgtgaaacgtggggtaacctcgag
cagttgcgccgtgagaaggaggtggtaggtatctatatctcagggcacccgctcgacgat
tttaagcacgagttacaaaacttttgcaatatcagtctatcggaattgcaagacttacaa
ccttttattaaccgtgagctcacagtagcgggtatggtagctgacctgcaacatcgtacg
gctaagaacggaaaaggttacggcttttttactcttgaggattacgacggctcttacgag
tttaaactctttggagatgattatttgaactatcagaaatatatggtaccaggggcgttt
ttgtatatcaaatttaaggtggtagaaggatttctcaatagagaaaccaaccaaagaggc
gaacctaggatacagtttctacagatgatgcagttgcaagatgtgatggaaaccctctct
aaaaaacttactttgcacgtgaatatagaggagattaaccaagatttgattgcaaaatac
aaagatttactacaaaagcacaaagggaaacagtctatttactttgttgtgcaccatcac
aatgaaaatattcacctaaatatggaaaatggtaatctaaaggtggcgattactaaatct
tttttagatgatttagacgctctatttgcaaaatatcatctcaatgaccgcagaatggag
aaaatagttgctaaaaagacagaagatactcacgacgacgaggaaatggcaatggaggat
ttgggattatcggagtag
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