Capnocytophaga sp. oral taxon 902: HW278_05355
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Entry
HW278_05355 CDS
T08773
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
capo
Capnocytophaga sp. oral taxon 902
Pathway
capo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
capo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HW278_05355 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
capo03019
]
HW278_05355 (rny)
Messenger RNA biogenesis [BR:
capo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HW278_05355 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
DUF4407
Motif
Other DBs
NCBI-ProteinID:
QLF50170
UniProt:
A0A7H8YUG0
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Position
complement(1263284..1264852)
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AA seq
522 aa
AA seq
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MDSTVIISIAVFIIALFIGFAIAKSLEKKNASKIILNAKNEADVLLKNAKAEAENIKKDK
IFQAKEKFLELKAEHEKAITAKDKKMAEAEKRIRDKESQVSNELAQNKRLKDELEKKTEE
ADFRLQTLDKKQEEIDRLHKSQVQQLEVISGLSAEEAKKLLTDSLRSEAQADAMAYIQNT
IEEAKLTAHQEARKIIINTIQRIGTEEAVDNCVSVFNLESDEVKGRIIGREGRNIRALEA
ATGVEIIVDDTPEAIILSCFDSVRREIARLSLHKLVTDGRIHPARIEEVVEKTTKQIEEE
IVEIGKRTVIDLGIHGLHPELVKCVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNP
KLAKRAGLLHDIGKVPQIESETPHALLGMEWAEKYGEKPEVCNAIGAHHDEIEMTSLLSP
IVQVCDAISGARPGARRQVLDSYIQRLKDLEDAAFTFQGVKKAYAIQAGRELRVIVESEK
VTDDKAAELSFNLSQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatagtacagttattataagtattgcagtttttatcattgcccttttcatagggttt
gctatcgccaaatcgctggaaaagaagaacgcctctaaaatcattctcaacgctaagaat
gaagccgacgttcttctgaaaaacgctaaagctgaagctgaaaatatcaaaaaagacaag
atattccaagcaaaagagaagttccttgaactaaaagctgaacacgaaaaagcaatcact
gccaaagataaaaaaatggcagaggctgagaagcgtatacgcgataaagagtcgcaagta
tctaatgaattggcacaaaataagcgcctaaaagatgagttggaaaagaaaacagaagaa
gccgactttcgcttgcaaactctcgataaaaaacaagaagaaatagaccgtttacacaaa
agtcaggtacaacaattagaggttatttcaggcttgtctgccgaagaagctaagaaacta
ctcaccgattcattgcgcagtgaagcccaagccgacgcgatggcttatatccaaaatacc
attgaagaagccaagctcactgctcaccaagaagcgcgcaaaatcattatcaacaccatt
cagcgtataggcactgaggaagcagtagacaattgcgtatcggtattcaatctcgagtct
gacgaggtgaaaggtcgtatcatcggtcgtgaagggcgcaatatccgtgccctcgaagca
gctactggggtcgaaatcattgtagacgatacccccgaagcgattatcctctcttgcttc
gactcggtacgtcgcgaaatcgcacgtctttctttgcacaaactcgtaaccgacgggcgt
attcaccctgcacgcattgaagaagtggttgaaaaaactaccaaacaaatagaagaagaa
attgtagaaataggtaaacgcaccgtgattgacctcggtatccacggactgcaccccgag
ttagtaaaatgtgtaggacgtatgaaataccgttcgtcatatgggcagaacctcttgcaa
cactcgcgcgaagtagccaagctctgcggagtaatggcagccgagttaggcttaaatcct
aaacttgccaaacgtgccggactcttgcacgacatcggtaaagtaccgcagatagaaagt
gagactcctcacgcactcctcggtatggaatgggcagagaaatacggcgaaaaacccgaa
gtgtgcaatgctatcggggcacaccacgacgagattgagatgacctccttgctttcgcct
attgtacaagtatgcgatgctattagtggggcacgtcccggagcacgtcgccaagtactc
gattcgtatatacaacgccttaaagacctcgaagatgctgctttcactttccaaggtgtg
aagaaagcctatgcaatccaagcaggtcgtgagttacgtgtaatcgtagaaagcgaaaaa
gtaaccgacgataaagccgcagaactatcatttaacttatcgcaaaaaatccaaactgat
atgacctacccaggtcaagtgaaagtaacggtgatacgtgaaactcgcgctgtgaatata
gcgaagtaa
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