Capnocytophaga sp. oral taxon 902: HW278_06755
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Entry
HW278_06755 CDS
T08773
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
capo
Capnocytophaga sp. oral taxon 902
Pathway
capo03030
DNA replication
capo03410
Base excision repair
capo03420
Nucleotide excision repair
capo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HW278_06755 (polA)
03410 Base excision repair
HW278_06755 (polA)
03420 Nucleotide excision repair
HW278_06755 (polA)
03440 Homologous recombination
HW278_06755 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capo03032
]
HW278_06755 (polA)
03400 DNA repair and recombination proteins [BR:
capo03400
]
HW278_06755 (polA)
Enzymes [BR:
capo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HW278_06755 (polA)
DNA replication proteins [BR:
capo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HW278_06755 (polA)
DNA repair and recombination proteins [BR:
capo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HW278_06755 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HW278_06755 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH
HHH_5
NYN_YacP
Pro-kuma_activ
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QLF50429
UniProt:
A0A7H8YUJ5
LinkDB
All DBs
Position
complement(1563596..1566394)
Genome browser
AA seq
932 aa
AA seq
DB search
MKKRLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAILGFMNSLLEVIKKEKPDHLAVAF
DKGGSVERTELFADYKANREETPEAIRLAIPYIHEILKALHIPIIEKEGYEADDIIGTLS
KQAEKQNYQVYMVTPDKDYAQLVSDNIFIYRPSRGGNDVEIWGVKEVQEKFEVQNPLQVI
DFLGMMGDAVDNIPGLPGVGEKTAKKLLADFGSMENLLAHTDQLKGKLRENIESNKEKGI
LSKQLATIMLDVPVTFDEEDFAMSEPDFEAVGRIFEELEFRQLLQNFLRTYQPQMPTTPP
PLTGNKPTEGQLSLFTQGDLFAQPQVMSEKKNSTNTPHFYQLADTPMAQQLLLQNLLQQT
EVCFDTETTSVNALEAELVGISFCWSAHKGYYVPFPTDKPATTKLLETFRPFFENERIGK
VGQNLKYDLKVLQNYNIEVRGALFDTMIAHYLLNPDMRHNMDILSETYLNYTPIAIESLI
GKGKAQRSMRTVPLDQVKEYAVEDADVTWQLKNVFKEEMPKVNAEKIYTDLEAPLIKVLA
AMEREGVNLDVPFLKEYAKTLDADIAQLEATIAEQAGENFNLASPKQLGDILFEKLKIDS
KPKKTKTGQYATSEEVLAPFASKHKIVADILEWRQVQKLKSTYVDALPLEVNKLTGRVHT
TYMQTVAATGRLSSNNPNLQNIPIRTPRGQQVRKAFIARNPDYVLLSADYSQIELRIIAA
LSEEHNMIDSFLRNEDIHRSTAAKVFHVPLEEVTREQRSHAKTVNFGIIYGVSAFGLSAQ
TNLSRSESKELIDTYYATYPNLRNYISKQIQFAQEHGYVETVLGRRRYLPDIHSRNQVVR
GAAERNAVNAPIQGSAADIIKIAMIRIQHELIRQQLQTRMLLQVHDELVFDVPKTELNIV
KPLIKEAMESAFTLAVPLVADLGVGDNWLDAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacggcttttcctactcgatgcttatgcccttatttttaggggttattacgct
tttatcaagaatccgcgtatcaactccaaagggttgaacacgtcggctattttgggcttt
atgaactctcttttagaagtaattaaaaaagagaagcccgaccaccttgctgtggctttc
gacaagggaggaagtgtggagcgcacggaactctttgccgactataaagccaatcgggag
gaaacgcccgaagccattcggttagcaatcccgtatattcacgaaatcttgaaagccttg
catattcctatcatcgaaaaagaaggttatgaggctgacgatatcatcgggacactctct
aaacaagctgaaaagcagaactaccaagtgtatatggtaacacccgataaggactatgca
caacttgtgagtgataatatctttatataccgaccttcgcgcggaggtaacgatgtggag
atttggggcgtaaaagaagtacaagagaaatttgaggtacaaaatcctttgcaggtaata
gacttcctcggaatgatgggtgatgcggtagacaatatacctggactcccaggagtaggc
gagaagaccgctaaaaagctacttgccgactttggctctatggaaaaccttctcgcccat
actgaccagctgaaaggcaaactgcgcgagaatatagagagcaacaaggaaaaaggaatc
ctctctaaacagttggctaccattatgctggacgtgcctgtaacgtttgatgaagaagac
tttgcgatgtccgaacccgattttgaagcggtagggaggatatttgaagagttagaattt
cgtcagttattacagaactttctcagaacgtatcagccccagatgccaacaacacccccg
ccacttacagggaataagcccacagaggggcagttaagtctctttacgcaaggcgaccta
tttgcccaaccgcaggtaatgagcgagaagaagaacagcactaacacacctcacttctac
caattagccgataccccaatggcgcaacaactgctcttgcagaatttattgcaacaaacc
gaagtgtgttttgataccgaaacgaccagtgtgaacgccctggaagccgaattggtaggg
atttctttctgctggtcggctcataaaggttattacgtacctttccctactgataaacca
gcaacaacaaaactgcttgaaactttccgtccgttctttgaaaatgagcgtattggtaag
gtaggtcagaatttgaaatacgaccttaaagtattgcaaaactacaacattgaggtgcga
ggcgcactcttcgatacgatgatagcccactatctgctgaatccagatatgcgccataat
atggatatcctcagtgaaacctatttgaactatacccctattgctattgagagtttgata
ggtaaaggtaaggcgcaacgctctatgcgtaccgttccactcgaccaagtgaaggaatac
gccgtggaagatgctgatgttacgtggcaactcaaaaacgtatttaaggaggaaatgccc
aaagtgaatgccgagaaaatctatactgatttggaagcgcctttgataaaagtgttagcc
gctatggaacgcgaaggagtgaatctcgatgtacctttcttaaaagaatacgctaagacc
ttagatgccgatattgcacaactcgaagccactatagccgagcaggcaggggaaaatttc
aatttggcatcgccgaaacagttaggagatattctttttgaaaaactgaaaattgacagc
aaacctaagaagacaaaaacaggtcagtatgctacttccgaagaagtattagcccccttt
gcttctaagcataagatagtagccgatatacttgaatggcgacaagtgcagaagctgaaa
tctacttatgtagatgctttgcctttggaggtgaacaaacttaccggtcgtgtacacact
acctatatgcaaacggtagctgcgacgggtagattgagcagtaataatcctaacttgcag
aatattcctatccgcactcctcgcggtcagcaggtgcgcaaggcgttcatcgcacgcaat
cctgattatgtgcttctctctgccgactattcgcaaatagagcttcgcatcatcgctgcc
ctgagcgaagaacataatatgattgactcattcctccgcaatgaggatattcaccgttcc
acagctgccaaagtgttccacgtgcctttggaagaggtaactcgcgaacagcgtagtcac
gccaagacagtgaactttgggattatctatggtgtatcggcttttgggctctcggctcaa
accaatttgagtcgttcagagagtaaggaattgatagacacttattacgctacgtatccc
aatctgcgaaactatatcagtaagcaaatacaatttgctcaagaacacggctatgtagag
accgtattaggaaggcgtcgctatctacccgatattcactctcgtaaccaagtagtgcgc
ggagcagctgagcgcaacgctgtgaatgccccgatacagggctcggctgcggatatcatc
aaaattgcgatgatacgcatacaacacgagttgattcgccaacaacttcaaacccgtatg
ctcttgcaagtacacgatgagttagtgtttgatgtacctaaaacagagctcaatatcgtt
aagcctctcattaaagaagcgatggagagcgcttttactcttgctgttccccttgtggca
gacttaggggtaggggataactggctcgatgcacattaa
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