Capnocytophaga sp. oral taxon 902: HW278_07635
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Entry
HW278_07635 CDS
T08773
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
capo
Capnocytophaga sp. oral taxon 902
Pathway
capo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
capo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HW278_07635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
capo03021
]
HW278_07635
03400 DNA repair and recombination proteins [BR:
capo03400
]
HW278_07635
Enzymes [BR:
capo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HW278_07635
Transcription machinery [BR:
capo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HW278_07635
DNA repair and recombination proteins [BR:
capo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HW278_07635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4249
Motif
Other DBs
NCBI-ProteinID:
QLF50591
UniProt:
A0A7H8YVY7
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All DBs
Position
1784878..1785870
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AA seq
330 aa
AA seq
DB search
MALFNFQKPDKVIMIESSDFEGRFEFRPLEPGYGLTIGNALRRVMLSSLEGFAITSVKFD
KVGHEFSTISGVREDVTEIILNLKQIRFKRQIEDIENETATITVSGKRQLTAGDFQKALS
GFQVLNTDLVICNMDSSASFTIEITIEKGRGYVSAEENAKPNAPIGVIATDAIFTPIKNV
KYSIENYRVEQKTDYEKLVFEIKTDGSIHPKQALTEAAKTLIHHFMLFSDERITLEADEI
AQTDTYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVETLGDLVSFNKADLMKFRNFG
KKSLIELDELVVNKGLVFGMDTSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcattattcaacttccaaaaaccagataaagttataatgattgaatcatctgatttc
gaaggacgatttgagtttcgccctttggagccagggtatggtttaacaataggtaacgca
ttacgaagagttatgctttcttcgttagaaggttttgcaatcacttctgtgaaatttgat
aaagtaggacacgaattttctactatatcaggagtaagagaagatgttactgaaattatt
ctcaatttgaaacaaatacgttttaaacgccagattgaggatatagaaaatgaaacagca
actattactgtttctggtaaaagacaattgactgccggtgattttcaaaaagctctttca
ggttttcaagtattaaatactgatttggtgatttgcaatatggattcttcagcttctttt
acaatagagattactattgaaaaaggacgcggttatgtttcggctgaggaaaatgcaaaa
ccaaatgcaccgataggtgtaattgctactgatgcaatttttacgcctattaaaaatgtg
aaatattctattgaaaattatcgtgttgaacaaaaaacagactacgagaagttagtcttt
gaaattaaaaccgatgggtctatacaccctaaacaagcacttacagaagctgcaaaaaca
ctcattcatcactttatgctcttctctgacgagagaattactttagaagctgatgaaata
gcacaaactgatacttatgatgaagaatcattgcatatgcgccagttgctaaaaactaag
ttggtggatatggacttatccgttcgtgcactcaattgtttgaaagctgccgaagtagaa
acattaggtgatttggtatctttcaataaagccgatttgatgaagtttagaaacttcgga
aagaaatcattaattgaacttgatgagttggtagtcaataaaggtttagtgtttggtatg
gacacctcgaagtataaattggataaagattaa
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