Corynebacterium appendicis: CAPP_00870
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Entry
CAPP_00870 CDS
T09384
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
capp
Corynebacterium appendicis
Brite
KEGG Orthology (KO) [BR:
capp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capp03032
]
CAPP_00870 (topA)
03400 DNA repair and recombination proteins [BR:
capp03400
]
CAPP_00870 (topA)
Enzymes [BR:
capp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CAPP_00870 (topA)
DNA replication proteins [BR:
capp03032
]
Prokaryotic type
DNA Topoisomerases
CAPP_00870 (topA)
DNA repair and recombination proteins [BR:
capp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAPP_00870 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WJY60126
LinkDB
All DBs
Position
164579..167527
Genome browser
AA seq
982 aa
AA seq
DB search
MAEQNGQGKTLVIVESQTKAKKIQKYLGDAYFVEASVGHIRDLPGRAADIPAKYKKEPWA
KLGVNPEAEFEPIYVVSQDKKKKVTDLRAKLKQSDKLLLATDPDREGEAIAWHLLEVLKP
KVPVERMVFNEITESAIKEAAENTRELDMDLVDAQETRRILDRLYGYEVSPVLWKKVMPR
LSAGRVQSVATRVIVERERERMAFIPAEYWDLTAKLARDSETFDAKLTLIDGSRIAQGKD
FDDRGKLKNDELVVVDEQDARALADALTGQDMTVTNVVSKPYTRRPYPPFMTSTLQQAAG
AKLHFTSARTMRIAQRLYENGHITYMRTDSTSLSKQGVAAARAAATELYGANYVADQPRR
YDRKVKNSQEAHEAIRPAGERFATPGELARSLDAEEFKLYELIWQRTVASQMEDARGTSV
TATISGTATTGENVELSASGRTITFPGWLRAYSDTQDKNEKYLPQLSEGDALAARDVTAD
GHSTNPPARYTEASLVKKMEELGIGRPSTYASIIKTIQDRGYVAPRGNALVPTWVAFSVV
GLMEQNFDALVDYEFTSSMEDELDEIARGTENRTQWLTGFYFGDADADESTAEAIARRGG
LKSIIENNLEAIDARRVNSLELFRDDEDRPVYVRVGRYGPYLERQVGVTDEGEPEYQRAN
LPESTTPDEVTKEMAEKLFATPPTGRELGANPKTGRTVVAKEGRYGPYVTELVRDDERAT
AEARAEEIIATERAEEDAQRKAEGKRAKNWETKTAANQKTKRIEQLVDEQLKPATASLFS
SMEPSSVTLDEALQLLSLPREVGEDPADGEMITAQNGRYGPYLKKGSDSRSLANEEQIFS
ITLDEARRIYAEPKRRGRAAAKPPLKMLGDNDVSGKPMTVKDGRFGPYVTDGETNASLQR
GDTPETMTDQRANELLSARRAREAEEGTGAAKKTTKKRTTKKSAKKSAKETAKKTAKKSA
KKTAKKPPQTTKRVVKAGSRRK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagcagaacggacagggcaagaccctggtcattgtggagtcgcagacgaaggcg
aagaagatccagaagtatctgggcgacgcctatttcgtcgaggcgtctgtgggccacatc
cgcgatcttcccggccgcgcggcggacattcccgcgaagtacaagaaggaaccgtgggcg
aagctcggcgtcaaccccgaggctgagttcgaaccgatttacgtggtcagccaggacaaa
aagaagaaggttacagacctgcgcgcgaagctgaagcagtccgacaagctgctgctcgcg
acagaccccgaccgcgagggcgaggcgatcgcgtggcacctgctcgaggtgctcaagccg
aaggtgccggttgagcgcatggtgttcaacgagatcaccgaatccgcgatcaaggaagcc
gcggagaatacccgcgagctggacatggacctcgtcgatgcgcaggaaacgcgtcgcatc
ctcgaccgcctctacggctacgaggtgtcgcccgtgctgtggaagaaggtcatgccgcgc
ctgtccgccggccgcgtccagtccgtggccacgcgcgtcatcgtcgagcgcgagcgcgag
cgcatggcgttcatccccgcggaatactgggacctcaccgcaaagctcgcccgcgattcc
gagaccttcgacgccaagctcacgcttatcgacggctcccgcatcgcccaaggcaaagac
ttcgacgaccgcggaaaactcaaaaacgacgagctcgtggtggtcgacgagcaggacgcc
cgcgcccttgccgacgctctgaccggccaagacatgacggtgactaatgtggtgtccaag
ccgtacacccgccggccgtacccgccctttatgacctcgacgctgcagcaggcagccggc
gcgaagctgcacttcacgtccgcccgcaccatgcgtattgcgcagcgcctgtacgaaaac
ggccacatcacctacatgcgtacggactcgacctcgttgtccaagcagggcgttgctgca
gcacgagctgcagcaacggaactatatggtgccaactacgtcgccgaccagccgcgccgc
tacgaccgcaaggtgaagaactcccaggaggcgcacgaggctattcgccccgccggcgag
cgcttcgccacccccggcgagctcgcccgttccctcgacgccgaggaattcaagctctac
gaactcatctggcagcgcaccgtggcctcccagatggaggacgcccgcggcacgtccgtc
accgcgaccatctctggcaccgcgacgactggcgagaacgtcgagctgtcggcctccggc
cgcaccatcacgttcccgggctggctgcgcgcctactcggacacccaggacaagaacgag
aaatacctgccgcagctgtccgagggcgatgcccttgccgcccgcgacgtcaccgccgac
ggccactccaccaacccgccagcccgctacaccgaggccagcttggtgaagaagatggaa
gaactgggcatcggacgcccgtcgacgtacgcgtcgatcatcaagaccatccaggaccgc
ggctacgtcgccccgcgcggcaacgcgctcgtgcccacctgggtcgcattctccgtcgtc
gggctcatggagcagaacttcgacgccctcgtcgactacgaattcacgtcgtcgatggag
gacgagctcgacgagatcgcccgcggcacagagaaccgcacccagtggctcacaggcttc
tacttcggcgacgccgacgccgacgagtccaccgccgaggccatcgcgcgccgcggcggg
ttgaagtcgatcatcgagaacaaccttgaggccatcgacgcccgccgcgtgaactccctc
gagctcttccgcgacgacgaggaccgcccggtctacgtccgcgtcggccgctacggcccg
tacctggagcgccaggtcggcgtgaccgatgagggcgagcccgagtaccagcgcgccaac
ctgcccgagtccaccaccccggacgaggtgaccaaggagatggcggagaagctctttgcc
actccgccgaccggtcgagagctcggcgctaacccgaagaccggccgcaccgtcgtggcc
aaggagggccgctacggcccgtacgtcaccgagctcgtgcgcgacgacgagcgcgccacc
gccgaggcccgcgccgaggagatcatcgccaccgagcgcgccgaagaggacgcccagcgc
aaggctgagggcaagcgcgccaagaactgggagactaagaccgcggccaaccagaagacg
aagcggatcgagcagcttgtcgacgagcaactcaagcccgccaccgcctctctcttctcc
tcaatggagccctcctcggtgaccctggacgaggccctgcagcttctttccctgccgcgc
gaggtcggtgaagaccccgccgacggcgagatgatcaccgcccagaacggccgctacggc
ccgtacttgaagaagggttccgactcccgttccctggcgaatgaggagcagatcttctcc
atcacgctcgacgaggcccgccgcatttacgccgaaccgaagcgccgcggccgcgccgcc
gcgaagccgccgctgaagatgctcggcgataacgatgtctccggcaagcccatgaccgtc
aaggacggccgcttcggcccgtacgtcaccgacggcgagaccaacgcgtccctccagcgc
ggtgacaccccggagacgatgaccgaccagcgcgcaaacgagctgctctcagcccgccgc
gcccgtgaagccgaggaaggcaccggcgccgcgaagaagaccaccaagaagcggacgacc
aagaaatctgcgaagaagtcggctaaggagacggcgaagaaaactgccaaaaagtcagcc
aagaagacggccaagaagccgccgcagaccaccaagcgcgtggtcaaggccggctcccgc
cgcaagtag
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