Corynebacterium appendicis: CAPP_05455
Help
Entry
CAPP_05455 CDS
T09384
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
capp
Corynebacterium appendicis
Pathway
capp03030
DNA replication
capp03410
Base excision repair
capp03420
Nucleotide excision repair
capp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAPP_05455 (polA)
03410 Base excision repair
CAPP_05455 (polA)
03420 Nucleotide excision repair
CAPP_05455 (polA)
03440 Homologous recombination
CAPP_05455 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capp03032
]
CAPP_05455 (polA)
03400 DNA repair and recombination proteins [BR:
capp03400
]
CAPP_05455 (polA)
Enzymes [BR:
capp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CAPP_05455 (polA)
DNA replication proteins [BR:
capp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CAPP_05455 (polA)
DNA repair and recombination proteins [BR:
capp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CAPP_05455 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CAPP_05455 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WJY61012
LinkDB
All DBs
Position
1088893..1091571
Genome browser
AA seq
892 aa
AA seq
DB search
MSTADSSSATKRLLLIDGHSMAFRAFYALPAENFSTSGGQHTNAVYGFLSMFSNILAEEQ
PTHVAVAFDIGRQTFRTERFPEYKAQRAAAPEEFKGQVSLIQDVLGDLSIVTLTKENYEA
DDILATLTTQAQDDYEVIIVTGDRDYLQLVNDRVTVLYPTRGVSTLTRFTPEEVEKKYGL
TPSQYPDFAALRGDPSDNLPNIPGVGEKTATKWIIQYGDLNSLIEHAEEIKGKAGNNFRE
RIEQVQLNRELTQMVRDLELPVGPDELELKPADVTAVATAFDDLEFGVNLRERVLAAVPT
DGAAPETQAEELPELTVDDEALDTWLAAHEGQGLALFVQGDTTPAGGDAWAVGIVDKQWH
GVSKRLSDLTPEEDAALKAWLESDAPKYLHSAKAAWHMLRGRGITLRGIAHDTAIAAYLL
RPGQRTYDLADVYQRHLQRQLAASSEQLSLLDRDTADLDSALAILELAAHLGEELRAIDS
FELYADLELPLVTILAEMEDTGIAVDMNVLEEQLKEIAQKVTDAEDTARSLVDEPDLNLS
SPKQLSVVLFDKLELPKTKKTKTGYSTAAKEIEALAAKNPHPFLDQLLAHREWQKLKSTI
EGLIKTVHDDGRIHTTFNQTVASTGRLSSTDPNLQNIPVRTEAGRRIRSAFTVGDGYECL
LTADYSQIEMRVMAHLSEDPGLIEAYKEGEDLHNFVGSRVFDVPIDEVTPELRRRVKAMS
YGLVYGLSAFGLSNQLGIPAGEAKKIMESYFQRFGGVKRYLDEVVEQARRDGYTSTVFGR
RRYLPELTSDNRVARENAERAALNAPIQGTAADIIKVAMIRVDAALNDASRDQPFQSRVL
LQVHDELVVEVAPGELEQVQAIVEEEMDRAITLRVPLEVSAGTGTDWDEAAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaccgctgattcttcctctgccacgaaacgcctgctgctcatcgacggccattcg
atggctttccgagctttctacgccctgcctgcggagaatttctccacctcgggcgggcag
cacacgaatgcggtgtacgggttcctgtcgatgttctcgaacatcctcgccgaggagcag
cccacccacgtggcggtcgccttcgacatcgggcgccagaccttccgcacagagcgcttc
ccggagtacaaggcgcagcgtgcggccgcaccggaggaattcaaggggcaggtgtcgctc
atccaggacgtgctgggggacttgagcatcgtgacgctcaccaaagagaactacgaggcg
gacgacatcctggccacgctgaccacgcaggcgcaggacgactacgaggtcatcatcgtc
accggcgacagggactacctccaactggtcaatgatcgcgtgaccgtcctgtacccgacg
cgcggggtctccacgctcacgcgtttcacgccggaggaagtggaaaagaagtacggtctc
acgccgtcgcagtacccggatttcgcggcgctgcgcggcgacccgtcggataacctgccg
aacattccgggcgtgggggagaagaccgccactaagtggatcatccagtacggagatctg
aacagcctcatcgagcacgccgaggagatcaagggcaaggccggcaacaatttccgcgaa
cgcatcgagcaggttcagctcaaccgcgagctcacccagatggtgcgcgatctcgagctg
cccgtcggaccagacgaactcgagctcaagcccgccgacgtcactgccgtggcgacggct
ttcgacgacctcgagttcggcgtcaacctccgcgagcgcgtgctcgccgccgtgcccacc
gacggcgccgcgcccgaaacacaggcagaagaactgccggagctcaccgtcgacgacgag
gcactcgacacgtggcttgcagcccacgagggtcaaggtctcgccctgttcgtccagggc
gacaccacgccggcgggcggggacgcgtgggcggtggggatcgtcgataagcagtggcac
ggcgtgtccaagcgcttgagcgacctcacgcccgaggaagacgccgcgctcaaggcgtgg
ctcgaatccgacgcgccgaaatacctccacagcgccaaggctgcatggcacatgctgcgc
gggcgcgggatcacgctgcgcggcatcgcccacgacaccgccatcgccgcgtacctgctg
cggcccggccagcgcacatacgacctcgccgacgtttaccaacgccacctgcagcgccaa
ctcgcggcatccagcgaacaactgagcctgcttgatcgcgacactgccgacctcgactcc
gccctcgccatcctcgagctcgccgcgcatttgggtgaggagctccgcgccatcgactcc
ttcgagctctacgccgacctcgagctgccgctcgtgaccatcctcgccgagatggaggac
accggtatcgccgtcgacatgaacgtcctcgaagagcagctgaaagagatcgcgcagaaa
gtcaccgacgccgaagacacagcacgttcgcttgtcgacgaacccgatctgaacctctcg
tcccccaaacaactctccgtcgtcctcttcgacaagctcgagctgcccaagacgaagaag
accaagaccggctattccaccgccgccaaggagatcgaggcgctcgcggcgaagaacccg
cacccgtttttggaccagttgctcgcgcaccgcgaatggcagaagctcaagtccaccatt
gaaggcctgatcaagaccgtccacgacgacggccgcatccacaccacgttcaaccagact
gtcgcctccactgggcgcctcagctccaccgacccgaacctgcagaacatccccgtgcgc
accgaggccggccgccgcatccgctccgcgttcaccgtgggtgacggctacgaatgcctc
ctcaccgcggactactcccagatcgagatgcgcgtcatggcgcatctctccgaagatccc
ggcctcatcgaggcgtacaaggaaggagaggacctgcacaacttcgtcggttcccgcgtc
ttcgacgtgcccatcgacgaagtcacccccgagctgcgccgccgcgtcaaagccatgagc
tacggcctcgtctacggtttgagcgctttcggcctgtccaaccagctgggcatccccgcc
ggcgaagcaaagaagatcatggagtcttatttccagcgcttcggcggcgtgaagcgctac
ctcgacgaggtcgtcgagcaggcccgccgcgacggatacacctccaccgtcttcggccgg
cgccggtacttgccggaactcacctccgacaaccgcgtcgcgcgcgaaaacgccgagcgc
gccgctctcaacgcgcccattcagggcaccgcggccgacatcatcaaggtcgccatgatc
cgcgtcgacgccgcgcttaacgacgcctcccgcgaccaacctttccaatcccgcgtcctc
ctccaagtccacgacgaactcgtcgtcgaagtcgcccccggtgagctcgagcaggtccaa
gcgatcgtcgaggaggaaatggaccgcgccatcaccctgcgtgtcccgctggaagtctcc
gccggaaccggcaccgactgggacgaagcagcacattag
DBGET
integrated database retrieval system
