Corynebacterium appendicis: CAPP_07225
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Entry
CAPP_07225 CDS
T09384
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
capp
Corynebacterium appendicis
Brite
KEGG Orthology (KO) [BR:
capp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
capp03016
]
CAPP_07225 (truB)
Enzymes [BR:
capp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CAPP_07225 (truB)
Transfer RNA biogenesis [BR:
capp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CAPP_07225 (truB)
Prokaryotic type
CAPP_07225 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
DUF2867
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WJY61357
LinkDB
All DBs
Position
1459030..1459938
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AA seq
302 aa
AA seq
DB search
MNVGQTADPLSTSGVVVVDKPAGVTSHDVVARLRRFFGTRKVGHAGTLDPMATGVLVAGI
ERGTKLLAHLVADEKVYSTTIRLGAATSTDDAEGDALRESDASQVSDAEIMEQVRALTGD
IMQVPSKVSAIKIGGKRAHELVREGKEVEIPPRPVTIVSFDVSGIRREGTFVDIDARVHC
SSGTYIRSLARDMGDALGVGGHLTALRREASGPFTLEHARTLDELEDHVALSLTLDEALT
TAWPVLEVTADEYAALAMGKWLEPRGLKGVHAAVGPDGRAVALVKEKGNRLSTTFVARPS
TL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgggccaaactgcagatccgctttccacctcgggcgtggttgtcgtcgataag
cctgctggcgtgaccagccatgatgtcgtggcgaggctgcggcgcttcttcggaacccgc
aaggtggggcacgcgggcacgctcgatccgatggccacaggcgtgctcgtggccggtatt
gagcgcggcacaaagctgctcgcgcacctcgtcgccgatgagaaggtctattccacgacg
atccgcctcggcgcggcgacgagcaccgacgatgcggaaggcgacgcgctccgcgaatcg
gacgcgtcgcaggtgagcgacgccgagatcatggagcaggtccgcgcgctgacgggcgac
atcatgcaggtgccgtcgaaggtgtcggcgatcaagatcggcggcaagcgggcgcacgag
ctcgtccgcgagggcaaggaggtcgagattccgccgcggcccgtcacgattgtcagcttc
gacgtctccgggatccgccgggagggcacgttcgtcgacatcgacgcgcgcgtgcactgt
tcgtcgggcacctacatccgctcgctcgcgcgcgacatgggcgacgcgctcggcgtcggc
gggcacctcacggcgctgcgccgcgaggcgtccggcccgttcacgctcgagcacgcgcgc
acgctcgatgagctcgaggatcacgtcgcgctttcgctcaccctcgacgaggctctcact
accgcgtggcccgtgctcgaggtcaccgccgacgagtacgccgcgctcgcgatgggcaaa
tggctcgaaccccgcgggctgaaaggcgtccacgccgccgtcggtccggacggcagggcc
gtcgcgctcgtcaaagaaaagggcaaccgcttatcgacgaccttcgtcgcccgcccctcg
actttgtaa
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