Corynebacterium appendicis: CAPP_08650
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Entry
CAPP_08650 CDS
T09384
Name
(GenBank) 2',5' RNA ligase family
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
capp
Corynebacterium appendicis
Brite
KEGG Orthology (KO) [BR:
capp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
capp03016
]
CAPP_08650
Enzymes [BR:
capp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CAPP_08650
Transfer RNA biogenesis [BR:
capp03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CAPP_08650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
WJY61636
LinkDB
All DBs
Position
complement(1754890..1755435)
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AA seq
181 aa
AA seq
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MIRVFAALFPSDEAKEHLVTALRPIRDFSRQEIRWTDPDNWHLTLAFYGDQPNEASAIRA
HLVQIAAFRPPLSLHLSGAGAFENRTLWTGVGGDTDNLRTLMAESADPTVDVRPRQRAHL
TIGRTGRRSHDPYAVPDIVRALSVYRGPDFTADEICLVQSHLGQGRAGGSRYEILERFEL
R
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgatccgggtcttcgcggcgctctttccctccgacgaggcgaaagaacaccttgtcacg
gcgctgcgcccgatccgggatttctcccgccaggagatccgctggactgaccccgataat
tggcatctcaccctcgccttctacggcgaccagcccaacgaggcctccgcgatccgcgcc
cacctcgtccagatcgctgcattccgcccgccgctgagtctccacctttccggcgccggc
gccttcgagaaccgcaccttatggaccggtgtcggcggcgatacagacaatctcagaacg
ctgatggcggagagcgccgacccgaccgtggatgtccgcccccgtcagcgagcccacctc
accatcggccgcaccggccgtcgttcccacgacccttacgccgtccccgatatcgtccgt
gccctgtccgtctaccgcggccccgacttcaccgccgacgagatctgcctcgtccaatcc
caccttgggcagggccgcgccggaggttcccgctacgagatcctcgaaagattcgaactc
cgatag
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