Capnocytophaga sp. H2931: CGC52_00360
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Entry
CGC52_00360 CDS
T05889
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
capq
Capnocytophaga sp. H2931
Pathway
capq03030
DNA replication
capq03430
Mismatch repair
capq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC52_00360
03430 Mismatch repair
CGC52_00360
03440 Homologous recombination
CGC52_00360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capq03032
]
CGC52_00360
03400 DNA repair and recombination proteins [BR:
capq03400
]
CGC52_00360
Enzymes [BR:
capq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC52_00360
DNA replication proteins [BR:
capq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC52_00360
DNA repair and recombination proteins [BR:
capq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC52_00360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ATA74027
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All DBs
Position
88270..89037
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AA seq
255 aa
AA seq
DB search
MKLKLSKPICFFDLETTGTDITKDRIVEISILKVFPNGNKESKTWLVNPTVPIPKEASDI
HGITDERVANEPTFKELAKTIHNMIKDSDLAGFNSDRFDIPLLAEEMLRAEIDFDLGNRV
TVDVQTIFHKMEQRTLSAAYKFYCDKILDDAHSAEADTNATYEIFKSQLERYDDLGTDIK
KISEFTTRKQSVDFAGFIVMNDKNEEIFSFGKHKGRRVEDILAEEPGYFGWILNADFPLY
TKKVLTAIKLRKFNS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaattatcaaaacctatttgtttttttgatttagaaaccacaggaacagat
attaccaaagatcgtatcgtagagatttctattttaaaagtttttccaaacgggaataaa
gaaagtaaaacctggttggtaaatccgacagtgcctattccaaaagaagcaagtgatatc
catggaattaccgatgagagagttgctaatgaacctactttcaaagagttagcaaaaaca
atccacaacatgattaaagattctgatttagcgggatttaattcagatcgattcgatatt
cctcttctggcagaagaaatgttacgtgccgaaatagattttgatttaggaaaccgcgtt
acagtcgatgtacaaaccatttttcacaaaatggaacaacgaaccttgagtgccgcctat
aagttttactgtgataaaattttagatgatgcccactcagcagaagccgatactaatgct
acgtacgagattttcaaatcccaacttgaacgatatgatgatttgggaaccgatattaaa
aaaatcagtgaatttacaacacgtaagcaaagtgttgattttgcaggttttatcgtgatg
aacgataaaaatgaagaaattttttcatttggaaaacacaaagggcgacgtgtggaagat
attttagccgaagaacctggctatttcggatggattctaaatgctgattttcctttatac
actaaaaaagtactgacagccattaagttacgtaaatttaattcatag
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