Capnocytophaga sp. H2931: CGC52_00540
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Entry
CGC52_00540 CDS
T05889
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
capq
Capnocytophaga sp. H2931
Pathway
capq00260
Glycine, serine and threonine metabolism
capq00460
Cyanoamino acid metabolism
capq00630
Glyoxylate and dicarboxylate metabolism
capq00670
One carbon pool by folate
capq00680
Methane metabolism
capq01100
Metabolic pathways
capq01110
Biosynthesis of secondary metabolites
capq01120
Microbial metabolism in diverse environments
capq01200
Carbon metabolism
capq01230
Biosynthesis of amino acids
capq01240
Biosynthesis of cofactors
capq04981
Folate transport and metabolism
Module
capq_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
capq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CGC52_00540 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CGC52_00540 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CGC52_00540 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CGC52_00540 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CGC52_00540 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CGC52_00540 (glyA)
Enzymes [BR:
capq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CGC52_00540 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ATA74059
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Position
124511..125785
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AA seq
424 aa
AA seq
DB search
MQRDNEIFDLIDDEEARQIHGIELIASENFVSDQVLEAAGSILTNKYAEGYPGRRYYGGC
EVVDEIEQIAIDRAKTLFGAEYANVQPHSGSQANTAVYAACLKPGDKILGFDLSHGGHLT
HGSPVNFSGKLYTPVFYGVEKETGLLNYDKILEIAEKERPRLIIAGASAYSRDIDFKKFR
EIADKVGAILFADISHPAGLIAKGLLNDPIPHCHIVTTTTHKTLRGPRGGLILMGKDFEN
PFGLKTPKGEIRMMSSLIDSAVFPGNQGGPLEHIIAAKAVAFGEALSDEFLHYAIQVQKN
AKKLASLLIEKGYDIISKGTDNHMMLIDLRNKNISGKEAEEALGKADITVNKNMVPFDTR
SPFVTSGIRVGVAAITTRGLKEADMETIAGFIDEAITNHTNDEALEAIAERVYDFMEERP
LFAY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtgataacgaaatttttgaccttattgatgatgaggaagcaagacaaatccat
gggattgagctaattgcctctgaaaattttgtcagtgatcaagtattagaagctgctgga
tccattttgacgaataaatatgcagaaggctacccaggacgtagatactacggtggttgt
gaggtggttgatgaaattgagcaaatagccattgatcgtgcaaagactcttttcggagct
gaatatgctaatgttcaaccacatagtggttcacaagctaatactgcggtatatgcagct
tgtttaaaaccaggagataaaattttaggattcgacctttcacatggcggacatctaaca
cacggatcacccgtgaacttttcaggaaaattgtacacacctgtgttctatggagtggaa
aaagaaacggggcttctaaactatgacaaaattcttgaaattgcagaaaaagagcgtcca
cgactcatcattgctggtgcatccgcctactctcgagacattgatttcaaaaaatttcgt
gaaatcgccgataaagtaggtgctattctctttgcagatatttcgcatcctgcaggattg
attgccaaaggattactaaacgacccgataccacactgccatattgtaacaacaactacg
cataagaccttgcgtgggcctcgtgggggacttatcctaatgggaaaagattttgagaat
ccgttcggattgaaaactccaaaaggagagataagaatgatgtcatcgttgattgatagt
gctgttttccctggaaaccaaggaggaccactggaacatataatcgctgctaaggcggtt
gcttttggcgaagcattgagcgatgaatttctacattatgctatccaagttcagaaaaac
gcgaaaaaattagcttctcttttgattgaaaaagggtatgatattatctctaagggaact
gataaccacatgatgctcatcgatttaagaaataaaaacatcagtggtaaggaagcggaa
gaggctcttggaaaagccgacatcacagtgaataaaaatatggtaccttttgatacacgt
tctccttttgttaccagtggtattcgtgtgggagtagcagcaatcaccactcgtggattg
aaagaagccgatatggaaacaatcgctggtttcattgatgaagcaattacaaatcacact
aacgatgaggctttggaagctatcgccgaacgcgtttatgattttatggaagaaagacca
ttgttcgcgtactaa
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