KEGG   Capnocytophaga sp. H2931: CGC52_00900
Entry
CGC52_00900       CDS       T05889                                 
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
capq  Capnocytophaga sp. H2931
Pathway
capq03030  DNA replication
capq03430  Mismatch repair
capq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:capq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CGC52_00900
   03430 Mismatch repair
    CGC52_00900
   03440 Homologous recombination
    CGC52_00900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:capq03032]
    CGC52_00900
   03400 DNA repair and recombination proteins [BR:capq03400]
    CGC52_00900
Enzymes [BR:capq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CGC52_00900
DNA replication proteins [BR:capq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CGC52_00900
DNA repair and recombination proteins [BR:capq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CGC52_00900
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNAX_ATPase_lid RuvB_N AAA_22 AAA_14 DNA_pol3_gamma3 Rad17 AAA_5 AAA_30 AAA_16 TIP49 DNA_pol3_delta_C ResIII nSTAND3 RCF1-5-like_lid AAA_19 AAA_7 AAA_24 KAP_NTPase NTPase_1 RNA_helicase AAA_assoc_2 AAA_18 DUF815 NPHP3_N Mg_chelatase AAA_28 Sigma54_activ_2 DUF5906 NACHT iSTAND Tuberin AAA_2 TsaE ABC_tran AAA_11 IstB_IS21 APS_kinase
Other DBs
NCBI-ProteinID: ATA74125
LinkDB
Position
218320..219411
AA seq 363 aa
MNNFIVSARKYRPQTFRDVVGQQAITDTLTNAIENNHLAQALLFTGPRGVGKTTCARILA
KKINEQYSGTQDDNDFAFNIFELDAASNNSVDDIRKLIEQVRIPPQVGKYKVYIIDEVHM
LSTAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVNDAREYLKYI
AGEQGIEAEDEALQIIAQKADGAMRDALSIFDRVVSFSGDRITRQATSEILNVLDYETYF
NVTDLILKNKLPDLLVTFNNIIAQGFDGHHFISGLASHFRDLMVCKNMSTISLMEMGEET
KRKYAQQTQQASVPFLMEAITIANDCDLKYRTSKNQRLLVEIALMQLASLTFEGDKKKMM
DAS
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgaacaattttatagtatcagccagaaaatatcgtccgcaaacgtttcgcgatgtggtg
gggcaacaagccattaccgatacgttgaccaatgctattgaaaataatcacttagcacag
gcacttctattcacagggcctcgtggagtgggaaagacaacttgtgccagaattttagca
aagaaaattaacgaacaatattccggtactcaagatgataacgattttgcgttcaatatt
tttgagttggacgcagcttcaaacaacagcgtggacgacatccgtaaactgatagagcaa
gtgcgtatcccgccacaagtgggaaaatataaagtgtatatcatcgacgaggtgcatatg
ctttcgactgctgcttttaacgcgtttttaaaaactttagaagagcctccaaaacacgct
attttcatcttagcaaccacggaaaaacacaaaatcattcccacaattctttctcgatgc
caaatatttgatttcaaaagaattacagtaaacgacgctcgtgaatatttaaaatatata
gctggagaacaagggattgaggctgaagatgaggctcttcaaataatcgctcaaaaggcg
gatggagccatgcgtgatgctctttctatttttgaccgagtagtaagtttctcgggggat
agaataacacgtcaggcaacttctgagattttgaacgttttggactatgaaacatacttt
aacgtaacagatcttattttaaaaaacaaactccctgatttattggtaactttcaacaat
atcatagcacaaggctttgacggacatcatttcatctcaggacttgcgagtcatttcaga
gatttaatggtatgtaaaaacatgtctacgatctcactaatggaaatgggagaagaaacc
aaacgaaaatacgcacaacagacacaacaggcaagtgttccttttctgatggaagccatt
actatcgccaacgattgtgatttaaaatatagaactagtaaaaatcagcgacttttggtt
gagattgctctaatgcaattggcttcattgacctttgaaggagataaaaaaaaaatgatg
gacgcttcataa

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