Capnocytophaga sp. H2931: CGC52_01495
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Entry
CGC52_01495 CDS
T05889
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
capq
Capnocytophaga sp. H2931
Brite
KEGG Orthology (KO) [BR:
capq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
capq03016
]
CGC52_01495
Enzymes [BR:
capq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CGC52_01495
Transfer RNA biogenesis [BR:
capq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CGC52_01495
Prokaryotic type
CGC52_01495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Integrin_A_Ig_2
Motif
Other DBs
NCBI-ProteinID:
ATA74229
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All DBs
Position
357015..357755
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AA seq
246 aa
AA seq
DB search
MRYFIEFSYNGKNYFGWQRQPHSVSVQEILENSLSTLLRTPIEVVGAGRTDSGVHAHQMF
AHFDIEKELDNQLIYRLNAFLPKDIAIHKLHRVTDQAHARFDALKRTYQYHISMKKDVFA
YESSMYLNLPLDLPKMEIATKKLFDYTDFQCFSKSNTDVRTYDCKIYDAFWQQQEHHLIF
TISADRFLRNMVRAIVGTLLDVGLGKISIVDFENIIKSKNRSKAGKSVPACGLFLVQVEY
PQSCFI
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatttcattgaattttcatacaatggaaaaaattactttggttggcaacgtcag
cctcattcagttagtgtgcaagaaatattagaaaatagtctaagcacattactgagaact
cctattgaagtagtgggggcaggacgcacagatagtggtgtacacgctcaccaaatgttt
gcccattttgacatcgaaaaagagcttgataatcaattgatttacaggcttaatgctttt
cttccaaaagatatagccattcataaacttcaccgtgttacagatcaagcacatgctcgt
tttgacgctctaaaacgcacctatcaatatcatatttctatgaaaaaagatgtgtttgcc
tacgagtcaagcatgtatttgaatcttcctttggatcttcctaaaatggaaatagctaca
aaaaaattatttgattatactgattttcagtgcttttcaaaatccaatacagatgtaaga
acttatgattgtaaaatctacgatgctttttggcaacagcaagagcatcatttaattttt
acgatttccgcagatcgcttcttgcgaaatatggttcgagctattgtgggcacattgctg
gatgttggcttgggaaaaatttccattgtcgatttcgaaaatattataaaaagtaagaat
cgaagtaaagcaggaaaatctgttcctgcttgtggattatttttagtacaagtggaatat
cctcaaagctgttttatatga
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