Capnocytophaga sp. H2931: CGC52_01540
Help
Entry
CGC52_01540 CDS
T05889
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
capq
Capnocytophaga sp. H2931
Brite
KEGG Orthology (KO) [BR:
capq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
capq03016
]
CGC52_01540 (truB)
Enzymes [BR:
capq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CGC52_01540 (truB)
Transfer RNA biogenesis [BR:
capq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CGC52_01540 (truB)
Prokaryotic type
CGC52_01540 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ATA75946
LinkDB
All DBs
Position
366189..366896
Genome browser
AA seq
235 aa
AA seq
DB search
MITPEEFSNGKILLIDKPLHWSSFQAINKIKWSIIKNYKLKKIKIGHAGTLDPLASGLLI
VCTGKFTKKITEFQEATKTYTGTIRLGATTPSFDMETEIDQTFSIEHITPELIEKTRQQF
VGEIVQYPPMFSALKKKGKRLYEFAREGDETIEIPSRTVSIEQFNLDTSEFPNIHFEVIC
GKGTYIRSLANDFGKALQCGGYLTALRRTKIGEFSVDEAISPDEFVINHILKSTK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
attattaccccagaagaattctccaacggaaaaatattactgatagacaaacctttacat
tggtcatcgttccaagctattaataagataaagtggtctataatcaaaaattacaaactc
aaaaagattaaaattggacacgcagggacgctcgacccacttgcttcgggtttattgatt
gtgtgtacaggaaaattcaccaaaaaaattactgagtttcaagaagctacaaaaacatat
acgggtactattcggcttggagcgaccacaccttcttttgatatggaaacggaaatcgat
caaactttttccatagaacacattactcccgagctaattgaaaaaactcgtcaacaattt
gtaggagaaattgttcagtatccgcctatgttttcagcccttaaaaaaaaaggaaaacga
ctttatgaatttgcacgtgaaggagatgaaactattgaaatcccttcacgaacggtttct
attgagcaattcaacttagatacaagtgaatttccaaatattcattttgaagtaatatgc
ggtaaaggaacgtacatccgttccttggctaatgattttgggaaagccttacagtgtggc
ggatacttaactgccttacgacgtacaaaaattggagaattttccgttgatgaagccatt
tctcccgatgaatttgtaataaatcatatattaaaatcaacaaaatag
DBGET
integrated database retrieval system
