Capnocytophaga sp. H2931: CGC52_01585
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Entry
CGC52_01585 CDS
T05889
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
capq
Capnocytophaga sp. H2931
Pathway
capq03420
Nucleotide excision repair
capq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
capq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGC52_01585
03430 Mismatch repair
CGC52_01585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capq03400
]
CGC52_01585
Enzymes [BR:
capq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC52_01585
DNA repair and recombination proteins [BR:
capq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC52_01585
MMR (mismatch excision repair)
Other MMR factors
CGC52_01585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
AAA_11
Ribophorin_II
Motif
Other DBs
NCBI-ProteinID:
ATA74245
LinkDB
All DBs
Position
378411..380753
Genome browser
AA seq
780 aa
AA seq
DB search
MEKYLAQLNDAQRAPVLQKEGPLMVIAGAGSGKTRVLTYRIANLIHLGVDAFNILALTFT
NKAANEMKKRITEIVGNEAKNLWMGTFHSVFAKILRIEADKLGYPQNFTIYDTQDSQRLI
NSIIKEMELDKDVYKYKQIQSRISSFKNSLITVRAYFNNPELMEADAMSKRPRMGEIYQA
YVERCFKAGAMDFDDLLLKTNELLNLYPDVLAKYQHRFQYILVDEYQDTNHSQYLIVKAL
ADRFQNICVVGDDAQSIYAFRGANINNILNFQQDYQNARVYRLEQNYRSTKNIVEAANSV
IDHNKTKLEKVVWTANELGEPIKIHRSPTDSDEGRFVAGSIFENKMNLQLPNSAFAVLYR
TNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEVKDMLAYLRLIINPNDEEALVRIINFPA
RGIGGTTLEKLTFAANHYKKSIFEIMYKINQIDGLNMNASTKQRLTDFVIMILNFQSLSK
TSNAFEIAEQVARKTGLLQELKKDGTPEGIAKMENIEEMLNGIKDFVEGQEDVADSTASL
AEYLEDVALVTDMDKDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSAMSVNSRAE
LEEERRLFYVALTRAEKQAYLTYAENRYRWGKLSDAEPSRFIDEINNQYVQYLTAPINNP
NYRYKPLINRDIFGEVDKSRLRLQKPTNSTPPPSHAPTGDELQRLRKLKPINSASVSNGT
NPNQGVALTEGMLVFHERFGRGKIISLEGIGSDRKASIDFESGGIRKILLKFAKLQVIEK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatatttagcacaactcaatgatgctcaacgagcccctgtattacaaaaggaa
gggcctctgatggttattgcaggagctggatctggaaagacaagagttttgacctatcgc
attgcaaatttgatacatctgggggtagacgccttcaatatattggcattgacttttacc
aataaagcagccaatgaaatgaaaaaacgtattaccgaaatcgtaggcaatgaggctaaa
aatctgtggatggggacgtttcactctgtttttgctaaaattttacgtattgaagctgat
aaattaggatatcctcaaaattttacaatttatgacacccaagattcacaacgattgata
aactcgatcatcaaggaaatggaattggacaaggatgtctataaatacaagcaaattcaa
tcacgtatttcgtcatttaaaaatagtttaatcaccgttagagcctactttaacaatcct
gagctgatggaagccgatgccatgtcaaaacgtccgcgtatgggggaaatctatcaggct
tatgtggagcgttgcttcaaagcaggagctatggattttgatgatttactactgaaaacc
aatgagttattaaatttatatccagatgtactggccaaatatcaacatcgttttcaatat
attttggtggatgagtatcaggatactaatcactcccagtatttgattgtcaaggcatta
gcagaccgatttcagaatatctgtgtggtaggagacgatgctcaaagtatttatgctttt
cgtggagcgaacatcaataacatcttaaactttcaacaagactatcaaaacgctcgggtc
tatcgactggaacaaaactatcgttcaacgaaaaacatcgttgaagctgccaattcggta
attgaccacaacaaaactaaacttgagaaagtggtatggacagccaacgaactaggcgaa
ccaataaaaatacaccgtagccccaccgactccgatgaaggacgttttgtagcgggatcc
atctttgaaaataagatgaacctacaattaccaaatagtgcttttgccgtactttatcga
accaactcgcaatcacgtgctattgaagatgccttgcgaaaacgcgacattccatacaga
atttacggtggattgtctttctatcaacgtaaggaagtgaaagacatgttagcatattta
cgcttgattatcaatccaaatgatgaagaggctttagtacgaattatcaatttccctgct
cgaggaattggaggaacaacacttgagaaacttacctttgccgcaaatcattacaaaaag
tcgatttttgaaattatgtacaaaattaaccaaatcgacggattgaatatgaatgcttcc
acaaagcaaagattgactgactttgtgattatgatacttaattttcaatcacttagtaaa
acatccaatgcttttgagattgccgaacaggtggctcgaaaaacaggattattacaagaa
ctcaaaaaagacggtacacctgagggaatcgccaaaatggaaaatatcgaagaaatgctc
aatggtattaaagattttgtggagggacaggaggatgttgccgatagcacagcttcttta
gccgaatatttggaggatgttgctttggtcaccgacatggataaagacactggtgatgat
gaccgcgtggcactgatgaccattcacttagccaaaggactggaatttccatacgtatat
attgtaggtatggaagaggatttgttcccttcagcgatgagcgtaaactcacgtgccgaa
ttagaagaagagcgtcgtctgttttatgtagctcttactcgtgcggaaaaacaggcttat
ttaacctatgcggaaaatcgctaccgttggggtaagctatcggatgcagaacctagccga
ttcattgatgaaattaacaaccaatacgtacagtacctaacagctcctataaacaatcca
aactaccgatacaaaccgctaattaacagagatattttcggagaagtagataaaagtcga
ctgcgcttacaaaaacctacaaactccacccctcccccttctcatgctccaacaggagat
gaactacaacgtttacgcaagctaaaacccatcaacagtgcttctgttagtaatggtact
aaccccaaccaaggagtcgccttaaccgaaggaatgcttgtttttcacgagcgttttggc
agaggaaaaatcatctctttggaaggtattggaagcgaccgaaaagcaagtattgatttt
gagtcaggaggcattcggaaaatactcctcaaatttgcaaaattgcaagtcattgaaaaa
tag
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