Capnocytophaga sp. H2931: CGC52_03320
Help
Entry
CGC52_03320 CDS
T05889
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
capq
Capnocytophaga sp. H2931
Brite
KEGG Orthology (KO) [BR:
capq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
capq03009
]
CGC52_03320 (rimO)
Enzymes [BR:
capq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CGC52_03320 (rimO)
Ribosome biogenesis [BR:
capq03009
]
Prokaryotic type
ribosomal protein modification factors
CGC52_03320 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TMF_TATA_bd
CLP1_P
CCDC22_CC
Motif
Other DBs
NCBI-ProteinID:
ATA74552
LinkDB
All DBs
Position
782654..783961
Genome browser
AA seq
435 aa
AA seq
DB search
MRTKSIKKNVINVVTLGCSKNVYDSEVLMGQLKAGGKEVVHEKEGNIVVINTCGFINNAK
EESVNTILDYVQRKEEGLVDKVYVMGCLSERYKPDLEKEIPDVDQYFGTSDLPALLKVLG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGSHRSTPIEDLVQEAEKLA
TKGVKELILIAQDLTYYGLDLYKQRKLADLLRALVKVEGIEWIRLHYAFPTGFPMDVIDV
MKEEPKICNYLDIPLQHISDNILKSMRRGTTKEKTTKLLKEFKQKLPEMAIRTTLIVGYP
GETQEDFETLKEFVKEMRFDRLGCFTYSHEENTHAYSLEDDVPEEVKLQRANDIMELQSQ
ISWELNQEKIGKTFRCLIDRKEGNYFVGRTEHDSPDVDNEVLIDAKKFYVKLGEFIDVKI
IDSADYDLYAEPLNL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaaatcaataaagaaaaatgtcataaacgtagttacattaggatgttccaaa
aacgtttatgacagtgaggttttgatgggacaactcaaagcgggtggaaaggaagttgta
cacgaaaaagaaggtaatattgtggttatcaatacatgcggattcatcaataatgccaaa
gaagagagcgtaaacactattttagattatgtgcaacgtaaagaggaaggtttagtggac
aaggtttatgtgatgggatgtttaagcgaacgttacaaacctgatttggaaaaagaaatc
cctgatgttgatcagtattttggtactagcgacttacctgctttgttgaaagtactgggg
gcagactacaaacacgagcttatcggtgagcgacttactacaacaccaaagaattatgcc
taccttaaaatagccgaaggctgcgaccgcccatgtagtttttgtgctattccgctaatg
cgaggaagccatcgtagcactcccattgaagatttggttcaggaagccgaaaaactcgca
accaaaggtgtgaaggagctgattctgattgcacaagacctaacttattacggattagac
ctttacaagcaacgaaaattagccgatttacttcgtgccttagttaaagtagagggtatt
gagtggattcgtttgcattatgcctttccgacaggtttcccgatggatgtcattgatgtg
atgaaagaagaaccgaagatttgtaattatttggatattccgctacaacacatttcagat
aacatcctcaaaagtatgcgaagaggcaccaccaaagaaaaaacgaccaagttactaaaa
gagtttaaacaaaaacttccagaaatggctatccgcacaacgttgattgtaggataccct
ggagaaacgcaagaggatttcgaaacccttaaagaatttgtaaaagaaatgcgtttcgat
cgtttaggatgtttcacctatagccacgaagaaaatactcatgcttatagtttggaagat
gatgttcctgaggaagttaaattacaacgtgccaacgatataatggagctacaatcacaa
atttcgtgggaacttaatcaagaaaaaatcggaaaaacattccgttgtcttatcgaccgg
aaggaagggaattactttgtaggtcgtaccgaacacgattcccccgatgtggataacgaa
gtgctgattgacgctaaaaaattctatgtgaaattaggtgaatttatcgatgtaaaaatc
atagattcagctgattatgacctatatgctgaacctttaaatctgtaa
DBGET
integrated database retrieval system
