Capnocytophaga sp. H2931: CGC52_03710
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Entry
CGC52_03710 CDS
T05889
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
capq
Capnocytophaga sp. H2931
Pathway
capq00521
Streptomycin biosynthesis
capq00523
Polyketide sugar unit biosynthesis
capq00541
Biosynthesis of various nucleotide sugars
capq01100
Metabolic pathways
capq01110
Biosynthesis of secondary metabolites
capq01250
Biosynthesis of nucleotide sugars
Module
capq_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
capq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CGC52_03710 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CGC52_03710 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CGC52_03710 (rfbC)
Enzymes [BR:
capq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CGC52_03710 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ATA74620
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Position
886466..887035
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AA seq
189 aa
AA seq
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MNIIQTEIKDVIIIEPKIFGDERGYFFESFSQEKFVEQVCKTTFVQDNESKSRYGVVRGL
HFQKPPFSQSKLVRVVVGKVLDVAVDIRKGSPTFGKHVAVELSAENKRQLFVPRGFAHGF
AVLSEEVIFQYKCDNYYNPKEEGSVLWNDPALQIDWKISHQNIILSQKDKESPLLKDTFH
FDFDVNLYE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaacataatccaaacagaaataaaagacgttatcatcattgaacctaaaatttttggt
gatgagcgcggatacttttttgagtcgttttcacaagaaaagtttgtggaacaagtttgt
aaaacaactttcgtacaggataacgaatcaaaatcgcgttacggtgtggtaaggggattg
catttccagaaacctccgttttcacaatcaaaattagtacgcgtagtggtaggaaaagtt
ttggacgttgcagtcgatatccgtaagggttcgcctacttttggcaaacacgtagccgtt
gagctttctgccgaaaacaaacgacaattgttcgtccccagaggttttgctcacggattt
gctgtgctgagcgaggaagtcatttttcaatataagtgcgacaattactacaatccaaaa
gaggaaggaagcgttctgtggaacgaccctgcattgcaaattgattggaaaatctctcat
caaaatattattctttcgcaaaaagacaaagaaagccccttgctgaaagatacttttcat
ttcgattttgatgtaaacctatacgaataa
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