Capnocytophaga sp. H2931: CGC52_04085
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Entry
CGC52_04085 CDS
T05889
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
capq
Capnocytophaga sp. H2931
Brite
KEGG Orthology (KO) [BR:
capq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capq03032
]
CGC52_04085
03036 Chromosome and associated proteins [BR:
capq03036
]
CGC52_04085
03400 DNA repair and recombination proteins [BR:
capq03400
]
CGC52_04085
DNA replication proteins [BR:
capq03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CGC52_04085
Chromosome and associated proteins [BR:
capq03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CGC52_04085
DNA repair and recombination proteins [BR:
capq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CGC52_04085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF4777
UBA_2
DUF6074
PqqD
Motif
Other DBs
NCBI-ProteinID:
ATA74687
LinkDB
All DBs
Position
complement(964352..964657)
Genome browser
AA seq
101 aa
AA seq
DB search
MTKAEIVSKIADKLGLDKNDVQSTVENFMDEVKASLESGNNVYLRGFGSFVIKTRAEKTG
RNISKNTTIKIPAHNIPSFKPAKVFVDGVKTKVKVKSGKKK
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcagaaatcgtatcaaagatcgctgataagttaggtcttgataaaaacgac
gttcaatcaacggttgagaactttatggatgaagtgaaagcatcgttggaaagtgggaac
aacgtgtatttgagaggttttggaagttttgttatcaaaacaagagctgagaaaacagga
cgtaatatttctaaaaatacaactattaaaatccctgctcacaacatcccttcattcaaa
cctgcaaaagtgtttgttgatggtgtaaaaacaaaagtaaaagtaaaatcaggaaaaaag
aaataa
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