Capnocytophaga sp. H2931: CGC52_05065
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Entry
CGC52_05065 CDS
T05889
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
capq
Capnocytophaga sp. H2931
Pathway
capq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
capq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CGC52_05065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capq03400
]
CGC52_05065
DNA repair and recombination proteins [BR:
capq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CGC52_05065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_29
AAA_23
AAA_27
DUF2813
SbcC_Walker_B
ABC_tran
AAA
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ATA76002
LinkDB
All DBs
Position
complement(1187090..1188169)
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AA seq
359 aa
AA seq
DB search
MYLKKIAVVNYRNISTKNLLFESGINCFVGNNGVGKTNLLDAIYHLGVGKSYFNPSASQN
IRHGEEFYMIEGLFERENREEQIVCSIKKGQKKIIKCNGKNYDRITEHIGKYPMVIISPA
DTDLIVDGSEVRRRFLDNVISQSDTAYLDTLIRYNRVLLQRNTILKQFAVNQYVDLLTLG
IYDQQLAELGQHIYQKRTQFMEAFLPVFQYQYEYLSEGKEQVSLSYESALHTTSLSELLK
QNLEKDRILQYTSQGIHKDDLLFEIDGFSMKKYGSQGQQKSFLIALKLSQFEVIKQQLRV
TPIFLLDDIFDKLDDKRVEKLVSLVTQQHFGQLFITDTHYDRTESVVKKRGVPYQIFKI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtatctaaaaaaaatagcagttgtaaattacagaaatatctccacaaaaaatcttctg
tttgaatcgggaatcaattgttttgttgggaataatggtgtgggcaaaaccaatctgttg
gacgctatctaccatttgggagtcggaaagagttacttcaatccatcggcatcgcaaaat
attcgtcatggcgaagagttttatatgattgaaggactttttgaacgagaaaatcgggag
gaacagattgtatgtagcattaaaaaagggcaaaagaaaattatcaagtgcaatgggaaa
aattacgatcggattacggaacatatagggaaataccctatggtgatcatatctcctgct
gacacagacctcatcgtagatggaagcgaggtgcgacgaagatttttagacaatgttatt
tcccaatccgataccgcttatctggatacgctcattcgttataaccgagtgttactgcaa
cgaaatacgatacttaaacaatttgcagtaaatcagtatgttgatttactgactcttggg
atttatgaccagcaattggctgaactgggacagcatatctaccaaaaaagaactcagttt
atggaagcctttttacctgtttttcagtatcaatatgaatatctatccgaaggcaaagag
caagtaagcctaagttatgaaagtgctttgcatacaacctctttatccgagttattgaaa
cagaatttggagaaagatcgcatattgcaatacacctcgcaaggcattcataaggatgac
ttgctctttgaaattgatggattttcgatgaaaaaatacggaagccaaggacagcaaaaa
tcctttctgattgcattaaaactatctcaatttgaagttattaaacaacagttgagagta
accccaatattcttgttggacgatatttttgataaattagacgataagcgagtagaaaaa
ttggtctcgttggtgacacagcaacattttggacagttattcatcaccgacactcattat
gaccgtacagaatcggtggtaaaaaaaagaggagtgccgtatcaaatttttaaaatatag
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