Capnocytophaga sp. H2931: CGC52_05350
Help
Entry
CGC52_05350 CDS
T05889
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
capq
Capnocytophaga sp. H2931
Brite
KEGG Orthology (KO) [BR:
capq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
capq01011
]
CGC52_05350
Enzymes [BR:
capq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CGC52_05350
Peptidoglycan biosynthesis and degradation proteins [BR:
capq01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CGC52_05350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
Rep3_C
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
ATA74896
LinkDB
All DBs
Position
complement(1263358..1264707)
Genome browser
AA seq
449 aa
AA seq
DB search
MKRYSLSVLFGLLVGNLVAQTPQNVPNDTINKIEQKSDEIFDNSQETPIYIREETTTLKD
HPKAESYDKKWLKELSNSDLFFQMSEVIHNEPIEDVMFEELSTEVLKQRLEKLNQKTPFN
VEYNPILERVIKSFLKNRRSSLERLMSLSDYYFPMFEQEMSNHKIPLEMKYLAIVESALN
PKARSRMGATGLWQFMFTTGKVYGLEVSNYVDERSDPVRSTKAAARFLSELYKIFGDWDL
VLAAYNSGPGNVTKAMRRSGGKKNYWNLRPYLPQETAGYVPAFLATLYIFEYAKEHGFRP
QKRANHHFVTDTVRVKQAVPFKNIAELTGMDIQEIQFFNPSYQLDVVPYVEGRNYALRLP
IEEIGKFVANEDMIYSYISEEISKREKPLPALLKGDYVRGGKKTTYIVKKGDVLGKIASR
HGVTVSNLKNWNKIKGNNIRVGQKLVIYK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatatagcttaagtgttttatttggtctgttagtaggaaatctggtggctcaa
acacctcaaaacgtgccgaatgacactatcaacaaaatagaacaaaaatctgatgagatt
tttgacaattcgcaagaaacccccatctacatacgtgaagaaacaacaactcttaaagat
catccgaaggccgaaagttatgacaaaaaatggttgaaagagctatctaattccgatctc
ttttttcagatgagcgaggttattcacaatgaacctattgaagatgtgatgttcgaggaa
ctttctaccgaagtattgaaacaacgcttagaaaaacttaatcagaaaacgccttttaac
gtggaatacaatcctattttggaacgagttattaaatcattcctaaaaaatagacgcagt
tcgttggagcgattaatgagtttgagtgactactactttcctatgtttgaacaggaaatg
agtaaccacaaaatccctttggaaatgaaatacttggcaattgtagagtcggcgttaaat
cctaaagcacgttcccgaatgggagcgactggtttgtggcaattcatgtttacaacggga
aaagtatatggtttggaagtgagcaactatgtggatgagcgtagtgacccggtacgttcc
accaaagcggcagctcgtttcttgagcgaactctacaagatttttggtgattgggatttg
gtgttggcggcatacaattcggggccaggcaacgtaaccaaagcaatgcgacgctcagga
ggcaagaaaaattattggaatttacgtccttatctgccacaggaaaccgctggttatgta
cccgcatttttggcgacactatatattttcgagtacgccaaagaacacggattcagacca
caaaaacgggcaaaccatcattttgtgacagatactgtgcgagtgaaacaggctgttccg
ttcaaaaatatcgctgaattgacaggaatggacatccaagagattcaatttttcaaccct
tcttatcaattagatgtggtgccgtatgtagaaggtcgaaattatgcgttgcgtttgcca
attgaagaaataggtaaattcgtagcaaatgaggatatgatctattcctacatcagtgag
gaaatttccaaacgtgaaaaaccgcttcccgcattgttgaaaggggattacgtacgtgga
ggtaaaaaaacgacctatatagtcaaaaaaggagatgtgttagggaaaattgcatcccga
cacggtgttacagtttcaaaccttaaaaattggaataaaattaagggaaataacatcaga
gtagggcaaaaattagtgatttacaagtag
DBGET
integrated database retrieval system
