KEGG   Capnocytophaga sp. H2931: CGC52_10935
Entry
CGC52_10935       CDS       T05889                                 
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
capq  Capnocytophaga sp. H2931
Pathway
capq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:capq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CGC52_10935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:capq03019]
    CGC52_10935
   03009 Ribosome biogenesis [BR:capq03009]
    CGC52_10935
Enzymes [BR:capq01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     CGC52_10935
Messenger RNA biogenesis [BR:capq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CGC52_10935
Ribosome biogenesis [BR:capq03009]
 Prokaryotic type
  rRNA helicases
   CGC52_10935
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII ParBc CoA_binding_2
Other DBs
NCBI-ProteinID: ATA75883
UniProt: A0A250ESI3
LinkDB
Position
complement(2585062..2586849)
AA seq 595 aa
MNSFKQLGLNESILKAITDMGFEKPSEIQEKAIPTLLSEDVDMVALAQTGTGKTAAFGFP
LLQKIDAETKETQALILSPTRELCLQITSELKLYSKYMPNIHVVAIYGGASIEEQTKSIR
KGAQIIVATPGRMQDMIRRGFVNISNIDICVLDEADEMLNMGFYEDITSILSHTPDTKNT
WLFSATMPNEVAKIARQFMYKPFEVTVGSRNQASNNIRHEYYMVNGRHRYQALKRLADAN
PDIFSVVFCRTKKDTQAVAEKLIEDGYNAAALHGDLSQNQRDLVMKSFRARQIQMLVATD
VAARGIDVDDITHVIHYQLPDETETYTHRSGRTGRAGKSGVSMVIIPKSEVKKIKSIEKI
IQQPFEQKPLPSGIEICEIQLYHLANNIKNSTVETAIEDYLPAIYDVLQGLDREEIIKRM
VAVEFSRFFNYYKNAEDLNASNGKEKGNSDNGEVRYFINIGERDGYDWKTLKDFLKATLN
LDRDDVFKVDVKNSFSFFNTDAELVDLVTSTFNDFQLDGRFVNVEISKKEERGSGRNGRD
SRGKGEFKGRNRGDSKRRDRDSKSEGRSSSRRKDRGRGQKAAQAFDNAFKRKKRK
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgaattcatttaaacagttaggactgaacgagtccatcctcaaagccattactgatatg
ggctttgaaaaaccttccgaaattcaagaaaaagccatccccaccctgttgtccgaagat
gttgatatggttgcgttggctcaaaccggaacagggaaaacagcggcttttggttttcct
cttttacaaaaaattgacgctgaaactaaagaaacacaagctcttatcctttctcctacc
agagaattgtgtttacaaattacttctgaattgaaattgtattccaagtacatgcctaat
attcatgtagttgccatttatggaggagcaagtatcgaagaacaaacgaaaagcattaga
aaaggggctcaaattattgtagctacgcctggtcgtatgcaggatatgattcgaagaggt
tttgtaaatatttcaaatatagatatttgcgttttagacgaagctgatgaaatgcttaac
atgggcttctatgaggacatcaccagtatcctatcacatacgcctgacacaaaaaatacg
tggcttttttcagcaactatgccgaacgaagtagctaaaattgcacgtcagtttatgtat
aaaccttttgaggttaccgtaggttctcggaatcaggcgtcgaataatatccgtcacgaa
tactatatggtcaatggacgccatcgctaccaagctttgaaacgtttggcagatgcaaat
ccggacatattttcagtggttttctgtcgtacaaaaaaagatactcaagcagttgctgaa
aaattaatcgaagatgggtataatgcagctgcattgcatggcgatttaagtcaaaatcaa
cgcgatttggttatgaaatcattcagagccagacaaatacaaatgttagtagcaactgac
gttgctgctcgagggattgatgttgatgatatcacacatgtgattcactaccaacttcct
gatgaaactgaaacctatacccaccgaagtggacgtacaggtcgtgcaggaaaatcggga
gtttctatggttatcatccctaaaagtgaggtgaaaaagataaaatccatagagaaaatt
attcaacaaccctttgaacaaaaaccactccccagtggcattgaaatttgtgaaattcag
ctctatcatctggcaaacaacatcaaaaatagtacagtagaaactgccatagaggactac
ttaccagctatttacgatgttttacaaggtttagatagagaagaaattattaaacgaatg
gtggcggtagagtttagccgtttcttcaattactacaaaaacgctgaagatttgaatgcg
tctaacggaaaagaaaaaggaaattccgataatggcgaggtacgttatttcataaacatt
ggtgaaagagatggttacgattggaaaactttaaaggacttcttaaaagcaaccttaaat
ttagaccgtgacgatgtttttaaagtagacgtaaagaacagcttctctttctttaatacg
gatgctgaattggttgatttagtgaccagtacatttaatgattttcaattagatggacgt
ttcgtaaacgttgaaatttctaaaaaagaagagcgaggtagcggtagaaatgggcgcgat
tcaagaggtaaaggagaatttaaaggcagaaaccgaggggactcaaaacgaagagatcga
gattctaaatccgaaggtcgttcttcatctcgaagaaaagacagaggcagaggacaaaaa
gcagcacaagcctttgataatgcctttaaaagaaaaaaaagaaaataa

DBGET integrated database retrieval system