Caproiciproducens sp. NJN-50: EQM14_08285
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Entry
EQM14_08285 CDS
T05807
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
capr
Caproiciproducens sp. NJN-50
Brite
KEGG Orthology (KO) [BR:
capr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
capr03032
]
EQM14_08285 (topA)
03400 DNA repair and recombination proteins [BR:
capr03400
]
EQM14_08285 (topA)
Enzymes [BR:
capr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EQM14_08285 (topA)
DNA replication proteins [BR:
capr03032
]
Prokaryotic type
DNA Topoisomerases
EQM14_08285 (topA)
DNA repair and recombination proteins [BR:
capr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EQM14_08285 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
DmmA-like_C
Toprim_4
Zn_ribbon_RPB9
DNA_ligase_ZBD
HypA
Motif
Other DBs
NCBI-ProteinID:
QAT49773
UniProt:
A0A410Q3B7
LinkDB
All DBs
Position
complement(1724288..1726369)
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AA seq
693 aa
AA seq
DB search
MSKLVIVESPAKAKTIKKYLGTGFDVVASMGHVRDLPENRLSVDIKNKFKPKYEIIKGKE
KLVQELKDLAGKSDSILLATDPDREGEAISWHLAYILGLDMNQKNRVTFNEITKTGVSNG
MQNPRNIDLDLVNAQQARRILDRLVGYKLSPFLSQKIRRGLSAGRVQSVAVRIIVDRENE
IRGFVPEEYWTIDAKLIPKGSRKVFAATFYGDENGKMKISSEEESNRILEELKGADFSVV
KVKKGTRRKSPAPPFITSTLQQEASRRLGFQARRTMKAAQELYEGVEVPGLGAVGLITYM
RTDSLRISEDAIKEAGDYIRERWGNKYLPDSPRHYKSRANAQDGHEAIRPSMPSLPPEKV
KESLSSDQYKLYKLIWERFLASQMSNCLQSTTQADIQAKNYIFKASGFTVTFDGFTVLYE
EAKDEKEEEGTALPELEAGMPLKLKEIAGSQHFTQPPPRYTEASLIKALEENGIGRPSTY
AATISTITGREYVVRDGKALKPTELGETVTNLMKERFPKIVNVKFTAQVEDDLDAVQSGK
TDWVETLEVFYGDFDKTLKTAKEEMQGVKIQLKEDVTDVICEKCGRHMVIKNGRYGKFLA
CPGYPECKNVKKYVQETGAECPKCGGKVIVKKTKKGRVFYGCSNYPNCDFVSWDEPSMEK
CPKCGKTLLKKKGKHPKLYCVTPDCGYEKTEEE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagctggtgattgtggaatctccggcgaaagcgaagacgattaaaaaatatctc
gggaccggtttcgatgtcgtggcgtccatgggccatgtgcgcgatctgccggaaaaccgt
ttaagcgtggatatcaaaaataagttcaagccgaaatacgaaattatcaagggaaaggag
aagctggtacaggaactgaaagacctggcgggcaaaagcgattccatccttctcgcgacc
gacccggaccgggagggcgaggcgatctcatggcatctggcctatatcctcggcttggat
atgaaccagaaaaaccgcgtcactttcaatgaaataacaaaaaccggcgtttcaaacggg
atgcagaatccccggaacatcgaccttgacctggtcaacgcgcagcaggcgcgccgcatt
ctggaccggctggtcggttacaagctcagcccgtttctgtcacagaaaatcaggcggggg
ctgtccgcggggcgggtgcagtccgtcgcggtgcgcattattgtggaccgggaaaacgag
atccgcggcttcgttccggaagaatactggacgatcgacgcgaaactgattccaaaagga
tcccgcaaggtttttgccgcaactttttacggcgatgagaacggcaaaatgaagatctcc
agcgaagaggagtccaatcggattctggaagagttgaagggcgccgatttcagcgttgtc
aaggtcaaaaagggaacgaggcgcaaatccccggcgcctccgtttatcacttcgaccctt
cagcaggaagcgtcgcgccggctcggatttcaggccaggcggacgatgaaggctgcacag
gagctgtacgaaggcgtggaggtcccgggacttggggccgtcggcctgatcacctatatg
agaacggattcgctgcgcatttcggaggacgcgatcaaggaggcgggcgattatatccgg
gagcggtgggggaacaaatatcttccggattctccccgccattacaagtcgagggcaaat
gctcaggacggccacgaagcgatccggcccagcatgccgtctcttcccccggaaaaggtg
aaggaaagcctttcgtccgaccagtataagctttataaactcatttgggaacggtttttg
gccagccagatgtcgaattgcctgcaaagcaccacgcaggccgatattcaggcaaagaac
tacattttcaaagcctccggattcacggtcaccttcgacggatttaccgtgctttacgaa
gaagccaaggacgaaaaggaagaagaaggtacggccctgcccgaactggaagccggcatg
ccgctgaagctgaaggagatcgcgggcagccagcacttcacgcagccgcccccgcgctat
acggaggcctctctcatcaaggcgctggaagaaaacggcatcgggcgcccgtccacttac
gccgcgacgatttccaccattacgggaagagagtacgtggtccgcgacggaaaggctttg
aagccgacggaactgggagagactgtcaccaacctgatgaaggaacggttcccgaaaatc
gtcaacgtcaaatttaccgcgcaggtagaagatgatctcgacgcggttcagagcgggaaa
acggactgggtcgaaacgctggaggttttttacggagattttgacaaaacgctgaaaacc
gccaaagaagagatgcagggggtcaagatccagcttaaggaggatgtgaccgacgtcatc
tgtgaaaagtgcgggcgccatatggtgattaaaaacggccgttacggaaagttcctggcc
tgtcccggatatccggagtgcaaaaatgtgaaaaaatacgtgcaggaaaccggtgccgaa
tgcccgaaatgcggcggaaaggtcattgttaaaaaaaccaaaaaagggcgcgtcttttac
ggctgctccaattacccgaactgcgattttgtctcctgggacgaaccttccatggaaaag
tgtccgaaatgcggcaaaacgcttctgaagaaaaagggaaagcatccgaagctgtactgc
gtcacgccggactgcggatatgaaaaaacggaggaagaatga
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