Caproiciproducens sp. NJN-50: EQM14_08320
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Entry
EQM14_08320 CDS
T05807
Name
(GenBank) helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
capr
Caproiciproducens sp. NJN-50
Brite
KEGG Orthology (KO) [BR:
capr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capr03400
]
EQM14_08320
Enzymes [BR:
capr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EQM14_08320
DNA repair and recombination proteins [BR:
capr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EQM14_08320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QAT49780
UniProt:
A0A410Q3C4
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All DBs
Position
complement(1733374..1736763)
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AA seq
1129 aa
AA seq
DB search
MRHFMLYFLSKDVGHKMLRLLLGRAGSGKTMAVRNALKDLAGSGDDKLMLIVPEQASFEN
ERAMLRLLGPVLARRVSVVSFSRLAEEVLRHYGGFAGRRLDDGGRSIFMSLALEQVKDRL
DIYRRNAESTELIGLLLDTCAEFKMCAVAPEDLFKAAEKMPDGTLRRKVSELSLILSAYD
ALVAQSYIDPLDDLTRLKEKLEQNDFFSGYTVMVDSFQSFTVQEYDVLSLILRQAKEVRA
ALCADRLDDPECGAGLFSLVRRTAKILIRLAKQNGVPVAAPIILESGTRFQSEDLKALEE
GIYRPSHRKPFSGACKAISIYEAKNSYDESAFVAATIRRLMIDGGYRYRDFAVVARSQES
YRGILDAALENWEIPYFMDRPEEIDAEPLMRLVLSAFRITQNGFRSDDVFLYLKTGLCGL
TPEQISLLENYTFLWNLSGKKWREEWKDSPEGFAEETKPGGAAQLKELNELRIAVVAPLE
RFAGRTADADGEEMAGAVYRLLEELHAAEHLKQFAKQLSDDGNPALAERELRVWDLLMGI
LDQTALVLGKNKVTGMRYAELLRMVVLSSRIASIPQGLDEVTVGAADRSRPADPKVVFLV
GCAQGQFPMVSGSGGLISDRERHELIGLGLELNDTGEGAAVQERFLAYSAMCTASQRLFL
CYPVSDEDGKANSPSSILTETRAVLPGVQIWNELLLEQTYFATALKPVMELSAQKWHGGD
PFSETLKELLRRRGKDRELASLAGAAEKRPFAFHDPRKATSLFSREMQVSATQIEIYHLC
RFQYFCRYGLGARERKTAELNALEYGSLMHYLLQRLFQEIGSAQINGVTDRELRGVILKF
LEDYVEARFGGLKNRTPRFAYLISRLADSAQIVARRIAEELAQSGFEPVDFELSIGGEIP
PLTIPLPDGGKVEIDGKIDRVDVMARNGVRYLRVVDYKTGQKEFRLSDVIYGMNLQMLIY
LAALCENGKRRYGEVLPAGVLYMPANRPSAAAKREDDGKKLEKDFGRKLRMDGLILNDAE
VVAAMEPDGKGTYLPVTLKGGVPSGEGHLITERELEQAFHYIRRLVADMAEELKRGKIAA
VPLSGDYDACAWCPYGAVCGHERDDLEREMQKWDRDAVIGEFSKGGETE
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcggcattttatgctatactttctttcaaaggatgtggggcataaaatgctgcgttta
cttttgggccgcgccggaagcggcaagacgatggccgtgcggaacgcgctcaaagatttg
gccggctccggcgacgacaagctgatgctgatcgtcccggagcaggcgtcgttcgagaac
gagcgcgccatgctccggctgcttgggccggtgctggcccgccgcgtgagcgtcgtgagc
ttttcccggctggcggaagaggtgctgcggcattacggcggctttgccggaaggcggctg
gacgacggaggccgcagcattttcatgagtctggcgctcgagcaggtgaaggaccgcctc
gacatttaccgccggaacgcggaaagcacggagctgatcggcctccttctcgatacttgc
gcggaattcaagatgtgtgccgtcgcgccggaggatcttttcaaagcggcggaaaaaatg
ccggacgggacgctgcgaagaaaagtttccgagctgtcgctgatcctttcggcttacgat
gcgctggtggcacagagctacatagatccgctcgacgacctgacacggttaaaggaaaag
ctggaacagaacgacttcttttcgggctataccgtgatggtggattcttttcagagcttt
accgttcaggaatatgacgtgctttccctgattctcagacaggcaaaggaagtccgcgcc
gcgctgtgcgcggaccggctcgatgacccggagtgcggcgcggggctgttttccctggtt
cgcaggacggcaaaaatcctgattcgtcttgcaaaacaaaatggggtcccggttgcggct
ccgattatattggaaagcggaacccgctttcagagcgaggatctgaaagctctggaggag
ggaatttatcggccctctcatagaaagccattttccggagcctgtaaagcgatttccatt
tacgaggcgaaaaacagctatgacgagtcggcgtttgtggccgcgacgattcgccgtctg
atgatcgacgggggataccgctaccgggactttgcggtggttgcccgcagtcaggaatcc
taccgtgggattctcgacgcggcgctggaaaactgggaaataccgtattttatggacagg
ccggaggaaatcgacgcggaaccgctgatgcgcttggtcctttcggcgttccgcatcacc
cagaacggcttccgctccgacgatgtgttcctttatctgaaaacgggactgtgcgggctg
acgccggagcaaatctccctgctggaaaattatacgttcctatggaatctgtcgggaaaa
aaatggcgggaggaatggaaggacagcccggagggctttgccgaagaaacaaaacccggc
ggcgctgcgcagctgaaagagctcaatgaactcaggatcgcggtagttgcccctttggag
cgattcgcgggcagaacggcggacgcggacggggaagaaatggcgggggccgtgtatcga
ttgctggaagaactgcacgcggcggaacatctgaaacagttcgccaaacagctttccgac
gacggaaatcctgcgctggcggaacgggaactgcgcgtctgggatctgctgatggggatt
ctggaccagactgcccttgttctcggaaaaaacaaagtgacagggatgcgatacgccgag
ctgcttcggatggtggtgctctccagccggatcgcgagcatcccgcaggggctggacgag
gtaaccgtcggcgcggcggaccgctcccggcccgcggatcccaaggtggtattccttgtg
ggatgcgcgcagggccagtttccgatggtctccggctccggcgggctgatcagcgacagg
gagcgccatgagctgatcggactggggctggaactgaacgacacgggggagggagcggcg
gtacaggaacgttttctggcctattccgccatgtgtacggcttcccaacggctttttctg
tgctatccggtctccgatgaggatggaaaagcaaattccccctcttccatccttacggaa
acccgcgccgttcttccgggagtgcagatatggaatgaacttctgctggaacagacctat
tttgccacggcgctaaaaccggtcatggaactgtccgctcagaaatggcacggcggcgac
cccttttccgaaacgctgaaagagcttctgcgccgccggggaaaggacagagaactcgct
tctcttgccggagcggcggaaaagcggccctttgcgtttcacgatccgcgtaaagcgaca
agccttttcagcagggaaatgcaggtttccgccacccagattgagatctatcatctctgc
cggttccagtatttctgccgctacgggctcggcgcccgggaacgcaaaaccgccgaactc
aacgcgctcgagtacggcagcctgatgcattatctgctgcagcggctgtttcaggagatc
ggaagcgctcaaattaacggcgtcacggaccgtgagctccgcggcgtcattctgaaattt
ctcgaagattatgtggaggcgagattcggcgggctgaaaaaccggacgccgcgctttgcc
tacctgatttcccggctggcggactccgcacagatcgttgccaggcgcatcgccgaagag
cttgcgcagagcggatttgaaccggtggattttgaactgtccatcggcggcgagattcct
ccgctgaccattccgctgccggacggcggcaaggtggagatcgacggaaaaatcgaccgg
gtggacgtgatggcccgaaacggggtccggtatcttcgcgtggtggactataaaacggga
cagaaagaattccgcctctccgacgtgatttacggcatgaatctgcagatgctgatttat
ctggcggcactttgtgaaaacgggaagagacgctacggcgaggtgcttccggccggggtg
ctgtacatgcctgccaaccgcccgtctgctgctgcaaagcgggaggatgacggaaagaag
ctggaaaaggatttcggaaggaaacttcgcatggacggtctgatcttaaacgatgcggag
gtagtcgccgcgatggagccggatggaaaagggacttatctcccggtcacgctgaaagga
ggcgttccttcgggcgaggggcatctgattacggaacgggaactggaacaggccttccat
tatattcgtaggctcgttgcggatatggcggaagaattgaagcggggaaaaatcgccgcc
gtgccgttgtccggagattacgacgcgtgcgcatggtgtccctatggagcagtttgcggc
cacgagcgcgacgacctggagcgtgaaatgcagaaatgggaccgtgacgccgtgatcggg
gaattttcgaaaggaggggagacggaatga
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