Caproiciproducens sp. NJN-50: EQM14_11580
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Entry
EQM14_11580 CDS
T05807
Name
(GenBank) RNA helicase
Organism
capr
Caproiciproducens sp. NJN-50
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
HHH_5
DUF4716
T6PP_N
Motif
Other DBs
NCBI-ProteinID:
QAT50351
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Position
complement(2396042..2398225)
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AA seq
727 aa
AA seq
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MARPFSSADAKRLIDEHNRIKSQLSAAVTSAEQYRSEILTSSEALVAQEVLSVLKDIPIE
EINRDKKGFRVKALRDYGYCSIADISTASVYTIASVHGISEDTAYSIKHIVGDIVSKARQ
GVKIKLSTDSKTAAATKLVTSIFKYNHALPLTENCRQILNTNIRKINNALADISPSTNGV
KWFFTSSINKQKATEAFNFLGQLLSSEYGKSASETLVAIDAINRSTNTEAWQDFSNNSIY
FFNILEDINPGILGTDDAVYGLPEDLAREIQEECFFPDGLLCELRRYQEWGVKYILHQEQ
VLLGDEMGLGKTIQAIAAMVSLRNIGATHFVVVCPASVITNWCREIRKMSKLSVTKVHGA
GRTAALRSWINDGGVAVTTYETTGYFKVDANFKFTLLVVDEAHYIKNPEARRTVNVRNLS
SHASRTLFMTGTALENKVDEMIALIKMLQPRIAAQIQGMAFMSAAPQFREKVAPVYYRRK
RVDVLTELPELIESKEWCTLLPNEEQLYEQAVLGKHYADARRVSWNVDDLHNSSKAKRLL
EIIEEAEAEERKVIVFSFFLDTIRKITLLLGNKCLNPINGSVTPQRRQEIIDEFDSAPAG
TVLAAQIQSGGTGLNIQAASVIVICEPQFKPSIENQAISRAYRMGQTRNVLVYRLLCENT
VDEKIMSTLENKQAIFDAFADKSVAASQSIDMDDKTFGDIIKEEINRINAKYGKSNTDEK
TGTEGVS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaccgtttagttcagccgatgcgaaacggcttattgatgagcacaacagaata
aagagccaactttcagccgctgtgacatccgcagaacaatatcggtctgagatactaact
tcatctgaggcacttgtagcacaagaagttctctctgttttgaaagatatccccattgag
gaaattaacagagataaaaaagggttccgcgtcaaagcattacgggactacggatactgc
tccatagcggacatttccacggcctccgtatatacaatagcctctgttcatggaataagc
gaagatacggcttattccataaagcatattgtcggtgatattgtttcaaaagctcgtcaa
ggtgtaaaaattaaactgagtacagatagcaaaaccgccgcagctaccaaactggtaacg
tcaattttcaaatataaccacgctttgccgctcacggagaattgtcgacaaattctaaat
actaacatccgtaaaatcaacaacgcactggctgatatttcgccatcgacaaatggggta
aaatggttttttacatcaagtatcaacaagcaaaaagctaccgaggcatttaatttcctt
ggacaactattatcatctgaatatggcaagtcagcatcagaaacattggttgctattgat
gctattaacagaagcacaaacactgaagcgtggcaagatttttccaataactccatttac
ttttttaatattttagaggatattaaccccggtattcttggcacagatgatgctgtttat
ggcctgccggaggacttagcacgcgaaatccaggaggaatgcttctttcctgatgggctg
ctctgcgagttgcgacgctatcaagaatggggcgtcaaatacatactgcatcaagagcag
gtccttctcggtgatgaaatgggactcggcaaaacgattcaggcgatagcggcaatggtt
tccttgcgaaacataggagcaacgcactttgtggtcgtctgccctgcaagcgtgattaca
aactggtgccgtgaaattcgtaaaatgagcaaattaagtgttacaaaagtacatggcgca
ggacgaactgcagcactgcgttcttggataaacgatggtggtgttgctgttactacctat
gaaacaacaggctattttaaggttgatgctaatttcaagttcacacttctggtagtggat
gaagcccactatatcaaaaacccagaagcgcgaagaacagtaaatgtcaggaatttaagc
agccatgcctcccgcaccctattcatgaccggtaccgcattagaaaataaagttgatgaa
atgattgcgctaataaagatgctccaacctcgaattgctgctcaaattcaaggaatggct
tttatgtctgctgcgccgcagttcagagaaaaggtcgcgccggtgtattacagacgaaaa
cgtgtagatgtcctaacggaattgccggaactcatcgaaagcaaagaatggtgtacgctc
ttgccaaacgaagagcagctatatgaacaagcagtcctcggaaagcactatgctgatgca
cgacgggtatcttggaatgttgatgacctacataattcctcgaaagccaaacgcttgctg
gaaatcattgaagaagctgaggcggaggagcggaaagtaattgtcttttctttcttcttg
gataccattcgaaaaattacattactactcggaaataagtgcttgaaccccataaatggc
tccgttacccctcaacgccggcaggaaataattgatgaatttgacagtgctcccgctgga
actgttctcgctgctcaaattcaatctggcggtaccggcttgaatattcaggcagcaagt
gtgattgtaatttgcgagccgcaatttaagccatcaatagaaaatcaagctatctcgcga
gcatatcgcatgggacaaacacgtaatgtattggtttatcgccttctctgtgaaaacaca
gtggatgaaaaaataatgtcaacattggaaaacaagcaagcgatatttgacgcatttgca
gataagtccgttgcagcaagccaaagcattgacatggacgacaaaacttttggtgatatc
atcaaagaagaaatcaaccgtattaatgctaaatatggaaaaagcaacacagatgagaag
acaggcacagagggcgtatcctaa
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