Caproiciproducens sp. NJN-50: EQM14_14070
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Entry
EQM14_14070 CDS
T05807
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
capr
Caproiciproducens sp. NJN-50
Pathway
capr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
capr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EQM14_14070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
capr03400
]
EQM14_14070
Enzymes [BR:
capr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EQM14_14070
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EQM14_14070
DNA repair and recombination proteins [BR:
capr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EQM14_14070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Zn_ribbon_TFIIB
DNA_ligase_ZBD
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Zn_ribbon_6
Zn_Ribbon_YjdM
DUF7560
DUF1272
Motif
Other DBs
NCBI-ProteinID:
QAT50800
UniProt:
A0A410Q6B4
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All DBs
Position
complement(2899407..2900234)
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AA seq
275 aa
AA seq
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MMELPEAITIAKQMNGAVVGKRVRRVHPPSKAHKFCWYAGDPAEYDAAVSGSAIRSAEGF
GIFAEMAFDNGKRLCFNDGVNARLVNRADAPKNHQLLMEFDDGTALVFTVAMYGGIILHD
GTYDNEYYLKSRTAVSPFFEQFEPYYCKLMAENKPTLSAKAFLATEQRFPGIGNGVLQDI
LFTAGIHPKRKIGTLSEAEWNNLFSCIVSVLRDMTEHGGRDTEKDLFGCPGGYRVKLSKN
TLASGCPRCGGELVKEAYLGGAVYYCPSCQPLMKE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgatggaattgcctgaagcaatcacaatcgcaaagcagatgaacggtgccgtcgtcggg
aagagggtgcgccgcgtccacccgccttcaaaagcgcataaattctgctggtatgccggc
gatccggcggaatacgacgcggcggtgagcggaagcgccattcgatcagccgaggggttc
ggcatcttcgcggaaatggcgtttgataacgggaaacggctgtgcttcaacgacggggtc
aacgcgcggctcgtaaaccgcgccgacgcgccgaaaaatcatcagctgctgatggaattt
gacgacgggacggctctggtcttcaccgtcgccatgtacggcggcatcatcctccatgac
ggtacgtatgataacgaatactacctcaaaagcagaacggcggtttccccgtttttcgag
cagtttgaaccgtattactgcaaattgatggcggagaacaaaccgaccctgagcgcgaaa
gcgtttcttgccacggagcagcgctttcccggtatcggcaacggcgtgctgcaggacatc
ctgtttaccgccggaatccacccaaaacgcaaaatcgggacactcagcgaagcagagtgg
aacaatcttttttcctgcatcgtttcggttctgcgcgatatgacggaacacggcgggcgg
gacacggaaaaggacctcttcgggtgcccgggcggctaccgggtgaagctgtcaaagaac
acgcttgcctccggctgcccgcggtgcggaggagagcttgtaaaagaggcctatctggga
ggagcggtgtattactgcccgtcatgtcagccgcttatgaaagaataa
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