Caproiciproducens sp. NJN-50: EQM14_14195
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Entry
EQM14_14195 CDS
T05807
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
capr
Caproiciproducens sp. NJN-50
Pathway
capr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
capr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EQM14_14195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
capr03021
]
EQM14_14195
03400 DNA repair and recombination proteins [BR:
capr03400
]
EQM14_14195
Enzymes [BR:
capr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EQM14_14195
Transcription machinery [BR:
capr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EQM14_14195
DNA repair and recombination proteins [BR:
capr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EQM14_14195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QAT50823
UniProt:
A0A410Q6B0
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All DBs
Position
complement(2921113..2922066)
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AA seq
317 aa
AA seq
DB search
MIEFEKPKIETSMLSGDGTYGKFIVEPLERGFGTTLGNSLRRVLLSSLQGVAVTSIKIDG
VLHEFSTIPGVKEDVTEIILNIKGLTTKMHCDGPKTVEISAEGPCEVTADSIKCDSEVEI
LNPDMHIATLGDGAKLYMELTLDKGRGYVSAERNKQNMNASIIGVLPVDSIYTPVYKVNY
NVEPTRVGQSIDFDKLTLEVSTNGVIGAQEAVSLAAKVLTEHLNLFVDLSDKGSSTEIMV
EKDDKGKEKVLEMTIEELDLSVRSFNCLKRAGINTVGDIISKSEDDMMKVRNLGRKSLEE
VVWKMASLGFNLRKDDE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagtttgagaagccaaaaattgagacgagtatgttatcgggcgacggaacgtac
ggcaagtttattgtcgaacccctcgaacgcgggttcggcaccacgctgggcaacagtctc
aggcgcgtgctcctgtcttcgcttcaaggcgtggcagtcacttccattaaaatagatggc
gttctgcatgagttttccacgatccccggcgtgaaggaggatgtcacggaaatcatcctg
aatatcaagggactgacgacaaagatgcactgcgacgggcccaaaacagttgagatctcc
gccgaggggccgtgtgaagtgacggccgactcaatcaagtgcgacagcgaggtggaaatt
ctcaacccggacatgcacattgcgacgctgggggacggcgccaaactgtacatggaactc
actttggacaaggggcgcggctatgtctccgcagagcggaacaagcagaatatgaacgcc
agcatcatcggcgtgctcccggtggattccatttacactcccgtttacaaggtgaattac
aatgtggagccgacccgcgtcggtcagagcatcgatttcgacaagctgacgcttgaggtt
tccaccaacggagtgatcggggctcaggaggcggtctctcttgccgcgaaagtcctgact
gaacatctgaacctgtttgtcgacctgtccgacaagggaagcagcaccgagatcatggtg
gaaaaggacgacaagggcaaggaaaaagtgctggagatgacgattgaggaactggacctg
tcggttcgctccttcaactgcctcaaacgcgccggaatcaacacggttggcgacatcatc
agcaagtcggaggacgacatgatgaaggtacgcaaccttggacgcaaatccctcgaagag
gttgtctggaagatggcctctctcggtttcaatctgcgcaaggacgacgaatag
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