Candidatus Paracaedimonas acanthamoebae: IM40_00255
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Entry
IM40_00255 CDS
T03240
Name
(GenBank) hypothetical protein
KO
K02652
type IV pilus assembly protein PilB
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
caq02044
]
IM40_00255
02035 Bacterial motility proteins [BR:
caq02035
]
IM40_00255
Secretion system [BR:
caq02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
IM40_00255
Bacterial motility proteins [BR:
caq02035
]
Pilus system
Pilus assembly proteins
IM40_00255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
nSTAND3
AAA_14
DSHCT
AAA_30
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AIL12303
LinkDB
All DBs
Position
65609..67273
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AA seq
554 aa
AA seq
DB search
MTDELFDLQAYLLKSGLISIDQIKIAEIEQHKQGKRLEEILVNLGFLSDQVLREIIADSK
GISIFNLQESIMDAHLLINFPKNIAERYQVLPLFCEEKTLHAALVDVDDLMALDQLRRFF
PHIINIIPYVATSTDLGQAIDKAYGHALSIEGLLCELETKESKDKQHTEGAAISFINTLL
IDAVKRRASDIHFEPEGTFVRCRYRLDGVLRQICTFHRQYWPMLLVRLKIMSEMDITESR
LPQHGRFSFIVANREVDFRAASHPTVHGENFVVRILDKRHSLLPLEELGFAETAISSIKQ
LIKAPQGLVVVTGPTGSGKITTLYSMLRYIASTDVNIMTLEEPVEYELSLIRQTEVREPG
GVSFIEGIRSILRQDPDIIFIGEVRDEETANMALRAAMTGHLVLTTLHTNNAFDIISRFK
DLGLSTQMLAGHLRGVIAQRLLRKLCSFCKFERAINKEEGLIFQKYKQEGYILYEAEGCH
HCEYTGYKGRVAVAEWLLFDEKMDDFLSDAKISELRGYAQTRGFQTMIHAALITAREGMV
NMAEIERVIGVRKI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgaactttttgatcttcaagcatatcttttaaaaagcggtctcatttcaatt
gatcaaataaaaatcgcagaaattgaacaacacaagcaaggaaaacgcttagaagaaatt
ctcgttaatttaggtttcttaagcgatcaagttctcagagaaattattgctgattcaaaa
ggtatttctatttttaaccttcaagaatctatcatggatgctcatcttctcatcaatttt
cctaaaaatattgctgagcgttatcaggtattacctttgttttgtgaagagaaaacgtta
catgcagctttagttgacgtcgatgatttgatggcgcttgatcagcttcggcgatttttt
cctcatattataaatattattccttatgttgctacttccactgacctaggccaagcgatt
gataaagcatatggtcatgctctatcaattgaaggtcttttgtgcgagcttgagacaaaa
gaaagcaaagataaacagcatactgaaggggctgcaattagctttatcaatacgttatta
attgacgctgtgaaaagaagagcttcagatatccattttgaacccgaagggacgtttgtt
cgttgcagatatcgtttagatggtgtccttcgacagatatgtacttttcatcggcagtat
tggccaatgcttcttgtgcgcttaaaaatcatgtctgaaatggatattacagaaagccga
ctaccgcaacatggtcgatttagtttcatcgttgctaaccgtgaggtcgactttagagcg
gcttcccatccaacagttcatggtgaaaattttgttgttcgtatcttagacaagcgtcat
tcgttgttaccgttggaagagttaggatttgcagaaacagccattagctctatcaagcaa
ctgattaaagcgccacaaggccttgttgttgtgacagggccaacaggttcgggaaaaata
acaactctttactcaatgttacgctatattgcttcaacagacgtcaacattatgacgctt
gaagagcctgtagaatatgaactttctttgattcgtcaaactgaggttcgtgagcctgga
ggtgtctcatttatagagggcatccgttcaattttgcgccaagatccagacattattttt
attggagaagtgagggatgaagagacagccaacatggctttaagagcagccatgacaggg
catcttgtcttaaccacgcttcatacgaataatgcttttgatataatttctcgttttaaa
gatttaggactttctacacaaatgttggcaggccatcttcgaggggtaattgcacaaaga
cttttaagaaaactctgctctttctgtaaatttgagagagccatcaataaagaagaaggg
cttatttttcagaaatataagcaggaaggttatattctatatgaggcagagggatgtcat
cattgtgaatatactggttataaaggacgtgttgctgttgctgagtggctattatttgat
gagaaaatggatgattttttaagtgatgccaaaatttctgaacttcgtggttatgctcaa
actcgaggatttcaaacgatgatacatgcagctcttatcacggctcgggaaggaatggtg
aatatggctgaaattgaaagagttattggggtgagaaaaatttaa
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