KEGG   Candidatus Paracaedimonas acanthamoebae: IM40_00505
Entry
IM40_00505        CDS       T03240                                 
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
caq  Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:caq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:caq03032]
    IM40_00505
   03036 Chromosome and associated proteins [BR:caq03036]
    IM40_00505
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:caq02048]
    IM40_00505
Enzymes [BR:caq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     IM40_00505
DNA replication proteins [BR:caq03032]
 Prokaryotic type
  DNA Topoisomerases
   IM40_00505
Chromosome and associated proteins [BR:caq03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    IM40_00505
Prokaryotic defense system [BR:caq02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    IM40_00505
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_2 HATPase_c_3 PLN_propep
Other DBs
NCBI-ProteinID: AIL12342
LinkDB
Position
complement(108043..110040)
AA seq 665 aa
MVDLFQAPRKTTKTDYSAKDIEVLEGLEPVRRRPGMYIGGTDERALHHLIAEVVDNAMDE
AVAGHASKIEVELAAEGFVTIRDNGRGIPIDPHPKFPNQSALEVILTTLHSGGKFGGDAY
ETSGGLHGVGLSVVNALSDHLTVEIVSQKQLWSQHYSRGHVTSPLTNKGPISNRRGTMIR
FHPDPEIFGAHAHFKPSLVYRMIRSKAYLFKGIEIHWLCDASLLKPEDGLPTKDIFHFPG
GLKDYLLETLKDIPLVCSDPFSGEAELPDNLGRVEWVVTWPLEGEGFSHSYCNTVPTPLG
GTHETGLRQALTKAIRGFGERLGNRKAAQITPEDCTSSAAVILSAFVRNPQFQGQTKEKL
VNNEITRAVETVIKDHLDHWLSGQRDVAETLLNHIIERVDERLRRKEARETLRQTPTRRL
RLPGKLADCISEKPHETEIFLVEGDSAGGPAKQGRNRKNQAVLPLRGKILNVASASSDKL
KANQEIQDLGKALGCGTGKNCDPSQLRYGRVIILTDADVDGAHIASLLLTFFFQEMRPIL
EKGHVYLALPPLYRITQGTKSLYARDDAHRDELLKKEFTGRGKIEISRFKGLGEMAWQQL
KETTLDPQTRTLLQVHLPQTEIEANFDDNGTLMIEDFVDALMGRRPEKRFNFIQANAAFA
QGIDV
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggttgatctttttcaagcaccacgcaaaacaacgaaaacagactacagtgccaaagat
atagaagttttggagggcctagagcctgtccgtcgtcgcccagggatgtatattggtggt
actgatgaacgcgcattacatcatctgatcgcagaggttgttgataatgcaatggatgaa
gctgttgcaggccatgcctctaaaatcgaagttgagttggctgctgagggttttgtgact
attcgtgataatggccgaggcattcccattgaccctcatcctaaattccctaatcaatct
gcattagaagtcatccttaccaccctacattcaggtggaaaatttgggggggatgcttat
gaaacttctggaggactccatggtgttggtctttctgttgtaaatgcgctgtccgatcat
ttaactgttgaaatcgtttcccaaaaacaactatggtcccaacattatagccgcggccac
gttacatctcctttaaccaataaaggtcccattagtaatcgtcgaggaacaatgattcga
tttcacccggatccggaaatttttggggcccacgctcatttcaagccttcacttgtctat
cgaatgattcggtcaaaagcatacctttttaaagggattgagatccattggttatgtgat
gcctcattgcttaagcctgaagatggcctcccaactaaagatatctttcatttccctggg
ggacttaaagattacttacttgaaactcttaaagatatccctctcgtttgctctgatcct
tttagtggagaagcagagcttccagataatttagggcgtgttgaatgggttgtaacctgg
cctcttgaaggggaaggcttttcacattcatattgtaataccgttcccactcccttagga
gggactcatgaaacaggcttgcgccaagctttaacaaaagccattcgagggttcggtgaa
cgtcttggcaaccgcaaagctgctcaaatcacacctgaagattgtacctctagtgcagcg
gtgattctatctgcttttgttcgaaatccccagtttcagggacaaacaaaagaaaagctt
gttaacaatgaaataacgcgtgccgttgaaacagttattaaagatcatttggatcattgg
ttatcaggccagagggatgttgcagaaactcttctaaatcatattattgagcgtgttgat
gagcgtttaagacgtaaagaagctagagagaccttacgtcaaacacctactcgacgtctg
cgtcttcctgggaaacttgctgactgtatttcggaaaaacctcatgaaacagaaattttt
ttagtcgagggagattccgcgggcggccctgctaaacaaggacgaaatcggaaaaaccaa
gctgttttacccttacgtggaaagattcttaacgttgcaagtgcttcaagtgataaactt
aaagcaaatcaggaaattcaagatttaggtaaagccttaggatgtggcacaggcaaaaat
tgtgacccctctcaacttcgatatgggcgcgttattatcttaacagatgctgatgtggat
ggtgcgcatatcgcctcacttctattaacttttttctttcaagaaatgcgccctatcctt
gagaaaggtcatgtttatcttgctttacctcctctctatcgaattacacaaggcaccaaa
agtctttatgcccgagacgatgcccaccgtgatgaactcttaaaaaaagaatttacaggc
cgtgggaaaattgaaatcagtcgctttaaaggattaggagaaatggcctggcaacagctt
aaagagaccactttagacccacaaacgagaaccttgttgcaagttcatctccctcaaact
gaaatcgaggcaaattttgatgacaatggcacccttatgatagaagattttgttgacgct
ttaatgggacgtcgtcctgaaaaacgttttaactttatccaagcaaatgcagcttttgct
caaggaattgatgtgtag

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