Candidatus Paracaedimonas acanthamoebae: IM40_00775
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Entry
IM40_00775 CDS
T03240
Name
(GenBank) hypothetical protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caq03009
]
IM40_00775
Enzymes [BR:
caq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
IM40_00775
Ribosome biogenesis [BR:
caq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IM40_00775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
TRM5-TYW2_MTfase
TRAM
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AIL12383
LinkDB
All DBs
Position
151616..152866
Genome browser
AA seq
416 aa
AA seq
DB search
MMTKKTTILKLDERGYGFAQDENNNSLIIPYSLPGEKVEIEKNQDHWHLKKLIQSSPHRI
TPPCPYYEACGGCVLQHMSPVAYTEYKMRRLSQALERYGLREVSMDPIVVLGPHLRRRAI
FHALRTATETLIGYYQLGSHHLVDIAHCLLLRFDINDLIIPLKQLLGQILKPKEKADILL
TSTKTGIDFLLKIKGNKAIDLSDIEGLKTFAYDNNLARLSFANDQEEWPIITLKSPQIEF
DSCGVEASADGFLQTSTGADQILSSLVVKELPATHKRIADLFCGRGTFSIPLSKVGRVDA
YEMDGKALKALTQAAKLHNLSLQTYTRNLFSDPLTPDQLEPYQTVVLNPPRQGAAAQSKI
LAQSKVSHIVMVSCNPDSFARDAALLQKGGYHLKKLSPLDQFLWSPHVEIVAHLIR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgaaaaaaacaacaatattaaagctggatgagagagggtatggttttgcgcag
gatgaaaataataattctctgatcattccttatagtttaccaggggaaaaggtagaaatt
gaaaaaaaccaggatcattggcacctcaaaaagctcatacagtcgagtcctcatagaata
acgcccccttgtccttattatgaagcttgtggagggtgtgttttacagcatatgtcgcct
gtcgcgtatactgagtataaaatgcggcgtctttctcaagccttagagcgttatgggctt
agagaagtctctatggatcctattgtagttttagggcctcacttgcgaaggcgggctatt
ttccatgctttgcgtaccgctactgaaacattgattggctactatcagctaggatctcat
catttggtagatattgctcattgtctcttattgcggtttgatattaacgaccttattatt
cctttaaaacagcttttagggcaaattttaaagcccaaagaaaaagcagatattttatta
acatcgacaaaaactggcatagattttttattaaaaattaaaggaaataaagccattgac
ctgtcagatattgaaggtttaaagacttttgcttatgacaacaatttagctcgtctttca
tttgcaaatgatcaggaagaatggcctattataacactgaaatcgcctcaaattgaattc
gattcttgtggtgttgaggcgtctgcagatggtttcttgcaaacaagtactggagctgat
caaattttgtcttctcttgtggtaaaagaattaccagctacgcacaaaaggattgccgat
cttttttgtgggcgagggacgttctcgattcccttgtcaaaggtggggagagtggatgct
tatgaaatggatggtaaagctttaaaggctctcacccaagcggctaaattacataattta
tccttacaaacctatacgcgaaatttattttctgatcccctgacacctgaccagcttgaa
ccttaccaaaccgttgtcttgaatcctcctcgtcaaggagccgcggcccaatcaaaaatt
ctggcacaaagtaaagtttctcatattgttatggtatcatgtaatccagactcatttgcg
cgtgatgcggctctattgcagaaaggaggctatcaccttaaaaaactcagtcctcttgat
caattcttgtggtctcctcatgtggaaatcgttgctcatcttatacggtga
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