Candidatus Paracaedimonas acanthamoebae: IM40_01025
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Entry
IM40_01025 CDS
T03240
Name
(GenBank) thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Pathway
caq04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
IM40_01025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caq03016
]
IM40_01025
Enzymes [BR:
caq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
IM40_01025
Transfer RNA biogenesis [BR:
caq03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
IM40_01025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
Asn_synthase
Arginosuc_synth
QueC
NAD_synthase
DUF7411
ThiI
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AIL12421
LinkDB
All DBs
Position
complement(197963..199090)
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AA seq
375 aa
AA seq
DB search
MTDYLYLSTEPSKTRVVVAMSGGVDSSVTAALLKEQGYDVVGLTMQLYDHGVAVDRKKAC
CAGQDIYDARQVAQQIGIPHYVLDYESRFQESVMEDFADSYLRGETPIPCIQCNQEVKFK
DLLTMARDLGGEVLATGHYIRWMPGPELHRAVDLNRDQSYFLFSTTKEQLSFLRFPLGGM
HKPEVRMHAERFGLKVAEKPDSQDICFVPNGDYARVVERLRPGALESGEIVHINGRVLGH
HQGIINYTIGQRKGLGISSDTGTPLYVIKVNPEKHQVIVGPKEALACPEVHLKDVNWLGE
MLETGKVRKVLVKIRSAQEPIPAFLELTSSHKAKVRFKEPEYGVSPGQACVFYNGDQVLG
GGWITQAPLLYEIRS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacagactacctttacctttcaactgaaccttctaaaacgcgcgttgtcgttgccatg
tcaggtggtgtagatagctctgtcacggctgcgcttttaaaagagcaagggtatgatgtt
gttgggcttacgatgcaactttatgatcatggggtggctgttgatcgcaaaaaagcttgt
tgtgcaggtcaagacatttatgatgcccgccaagttgcgcagcaaattgggattccccat
tatgttcttgattatgaaagccgcttccaagagtcagtgatggaagatttcgcagatagt
tatttgcgaggcgaaacgcctattccttgcatacaatgcaaccaagaagtaaaatttaaa
gaccttcttacgatggcccgcgacttgggtggtgaagtgctggcaacagggcattatatc
cgctggatgccaggacctgagcttcaccgtgctgtcgatttaaatcgtgatcaaagttac
tttttattttcaacaacgaaagaacaactctcgttccttcgctttcctctcggtggaatg
cataaacccgaagtccgcatgcatgccgaacgttttgggttgaaagttgctgagaaacct
gacagccaagatatttgttttgtccccaatggagattatgcgcgcgttgttgaacgtctg
cgccctggcgctcttgaaagtggagaaattgtgcatatcaacggccgcgtccttggtcat
caccaaggcatcattaattacaccataggacaacgcaaggggttaggtatttcgagtgat
acaggcactcctttatatgtcatcaaagtaaatcctgaaaaacatcaagtgattgttggc
cctaaagaagctttagcttgccctgaagtccatcttaaagatgttaattggcttggagag
atgcttgagacaggtaaagtgagaaaagtccttgttaaaattcgctctgcacaagaacct
attcctgcgtttcttgaattaacttcttctcacaaagcaaaggttcgctttaaagaacca
gaatacggtgtttctccaggacaggcttgcgtcttttataatggtgatcaagtccttggt
ggcggttggattacccaagcacctttgttatatgaaatacggtcgtga
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