Candidatus Paracaedimonas acanthamoebae: IM40_01140
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Entry
IM40_01140 CDS
T03240
Name
(GenBank) microcin ABC transporter ATP-binding protein
KO
K13896
microcin C transport system ATP-binding protein
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Pathway
caq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IM40_01140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caq02000
]
IM40_01140
Transporters [BR:
caq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Microcin C transporter
IM40_01140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
AAA_29
AAA_16
Mg_chelatase
nSTAND3
nSTAND1
DUF87
ATP-synt_ab
NB-ARC
AAA_13
AAA_25
NACHT
DEAD
APS_kinase
AAA_23
Pox_A32
MobB
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
AIL12441
LinkDB
All DBs
Position
219825..221408
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AA seq
527 aa
AA seq
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MSLPLLSIRDLWVRFGDFNAVKNVSFDLNRGETMALVGESGSGKSVTALSILKLLPYPQA
AHPQGEIRFKGENLLKASNGRLREIRGDQISMIFQEPMTSLNPLHTVEKQIGEVLSLHRN
FRGSQIRERVVELLELVGFTDAFDRLQSYPHQLSGGQRQRAIIAMALATDPSLLIADEPT
TALDVTTQAQILDLLKVLQQKLNMALLLITHDLSIVQKMAEKVVIMQKGECVETGLTENI
FKNPQHPYTQQLLNSEPRGAPKELDQSAPIILEAKNLFVRFVRKSALFSPKTYFNAVKDV
SLQVRQGETLGIVGESGSGKTTLAFALLRLQESSGEILLQGTPIHQLKNKNLRALRHKFQ
IVFQDPFSSLSPRMTIAEIIGEGLKIHHPTLTVAQREGLIIESFEEVNLDPETRNRYPHE
FSGGQRQRVAIARALILKPQILVLDEPTSALDRAIQVEVLELLRNLQAKHHLTYIFISHD
LKIIRAVSHHVLVMRQGSIVESGPTNVIYEKPQNPYTKALFKAAFEL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttccattattatccatccgcgatttatgggtacgttttggcgattttaatgct
gtaaaaaatgtaagctttgatttaaaccgcggtgaaaccatggctcttgttggtgaaagt
ggctctggtaaatcagtgacagctttatcaatcttaaaattacttccctatcctcaggcg
gctcatcctcaaggagaaatacgttttaaaggagaaaatcttttaaaggcttcaaatgga
cgcttgcgtgagattcgtggcgatcaaatttctatgattttccaagagcctatgacttct
cttaatccgcttcatacagtcgaaaagcaaattggtgaagtattatcattgcatagaaat
tttagaggttctcaaattcgagagagagttgtcgagcttcttgagcttgtcggctttaca
gatgcgtttgatcgactgcaaagctatcctcatcaactatctggggggcaaagacaaagg
gccataattgctatggctttagcgacagatccttctttattgattgctgatgagcccaca
acagctctagatgtaacaactcaagcacaaattttggatcttcttaaagtcctgcagcaa
aagcttaatatggcattattgttgatcacgcatgatctttctattgtgcaaaaaatggca
gagaaagttgtgatcatgcaaaaaggagaatgtgtggaaactggccttacagaaaatatc
tttaaaaatcctcaacatccttacactcaacagttgttaaattcggaaccacgcggcgca
ccaaaagaattagatcagagtgcaccaattattcttgaggcaaaaaatttatttgtcagg
tttgttcgcaaatcagcgcttttttctcctaaaacttactttaatgcagttaaggatgtt
tctttgcaagtgcgtcaaggagaaacgcttgggattgtgggtgaaagtgggtctggcaaa
acaacgttagcctttgctcttttaaggcttcaagaaagcagcggtgagattctcttacaa
ggtactcctattcatcaattaaaaaataaaaatttacgcgcattgcgccataaatttcaa
atcgtttttcaagatccttttagttctttgagtcctcgaatgacaattgcggagattatt
ggtgaaggtctaaaaattcaccatccaacattaactgttgcgcaacgagaaggacttatc
atcgagtcatttgaagaagtgaatttggatcctgagacgcgtaaccggtatcctcacgag
ttttcaggagggcaaaggcaacgtgttgcaattgcacgtgctcttattttaaaaccacaa
atacttgtgcttgatgagccaacttcagctttggatagagcaatccaggttgaagttctt
gagcttctcagaaatttacaagcgaagcatcatctaacatacatttttattagccacgat
ttaaaaattattcgggcagttagccatcatgttcttgttatgcggcagggttcaattgtt
gaatctgggcctacaaatgttatttatgaaaaaccacaaaacccttatactaaagcttta
tttaaagctgcttttgagctttag
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