Candidatus Paracaedimonas acanthamoebae: IM40_01215
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Entry
IM40_01215 CDS
T03240
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caq03400
]
IM40_01215
Enzymes [BR:
caq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
IM40_01215
DNA repair and recombination proteins [BR:
caq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
IM40_01215
Prokaryotic type
IM40_01215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AIL12454
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All DBs
Position
complement(231819..233240)
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AA seq
473 aa
AA seq
DB search
MKTSPLILWFRQDLRLQHHPAFEVAKATGLPILPLYILDDDTPGPWKMGAAQRWWLHHSL
LSLNKDLDAQGGKLILRRGSPSRVLQDVLQETGAQSIYWSRCYEPFSIVRDTGLKKDFIE
QGITIKSFNSSLLFEPWEIKNQQGQPYKIFTQFWKKCLAQGPRFSIFENTTLAQFYTHLK
SEDLTTWELTPTHPNWAHGFSELWQPGEDGAHQKLEIFFTHHLKEYKETRNRPGYYGTSR
LSPHLHFGEISPHQIWRCFQQLTNSPPSSESYLAEIGWREFCYHLLYAFPSLPERPFQKK
FTDFQWKNNNDTLKAWQQGNTGYPIVDAGMRELWHTGWMHNRVRMIVASFLTKHLLLSWQ
EGEKWFWNTLVDADLANNAANWQWIAGCGADAAPYFRIFNPTLQGEKFDPQGDYVRRWVP
ELKNLSNSFIHKPWQASAAELNQAGVILGKTYPLPLVNHGDARDRALESYRQL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttcaccacttatcctctggtttcgtcaagatttacggcttcagcaccatcca
gcttttgaagttgctaaagcaacagggctgccaattcttccgctttatattttagatgac
gatacgcctggtccttggaaaatgggagctgctcaacgatggtggcttcaccacagcctt
ctctctttaaataaagatttggatgctcaaggggggaaacttattctaagacgtggctct
cctagcagagttcttcaggatgtacttcaagaaaccggagctcaaagcatttattggagc
cgttgctatgaaccgttttctattgttcgtgatacaggattaaaaaaagatttcattgag
caaggaattacgattaaaagctttaactcttcccttttatttgaaccttgggaaattaaa
aatcaacaaggccaaccttataaaatttttactcaattttggaaaaaatgtcttgcacaa
ggcccccgtttttcaatatttgagaacacaactttggctcaattttatacccatcttaaa
agtgaagatcttacaacgtgggaattaacaccaactcaccctaattgggctcacggattt
tctgaattatggcaaccaggtgaggatggtgctcatcaaaagcttgagattttcttcaca
catcatcttaaagagtataaagagacacggaaccgaccaggttactatggaacttctcgc
ctttctccccatcttcattttggagagatcagccctcatcaaatttggcgatgctttcaa
cagttgacaaactcacccccctcttctgaaagttatcttgcagaaattggctggcgagaa
ttttgttaccaccttctctatgcctttccttcattacccgaacgacctttccaaaaaaag
tttacggattttcagtggaagaataacaacgatacattaaaagcatggcaacaaggaaat
acaggttatccaattgtggatgctggcatgcgtgagctttggcatacaggatggatgcat
aatcgcgtgcgtatgatcgttgcttcatttttaacaaaacaccttttgctatcgtggcag
gaaggtgaaaaatggttctggaatacgttagtagatgcagaccttgcaaataatgccgcc
aattggcaatggattgcaggatgtggggcagatgctgctccttatttcagaatctttaat
ccgacccttcaaggtgaaaaatttgaccctcaaggtgattatgtacgccgctgggtcccc
gaattaaaaaacctctcaaattcttttattcacaaaccttggcaagcctctgcagcagag
ttaaaccaagcaggtgttatcttaggaaagacttatcctttgcccctggtcaaccatgga
gatgctcgtgatcgcgcgcttgaaagctaccgacagctttaa
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