Candidatus Paracaedimonas acanthamoebae: IM40_01320
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Entry
IM40_01320 CDS
T03240
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06020
energy-dependent translational throttle protein EttA
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caq03016
]
IM40_01320
Transfer RNA biogenesis [BR:
caq03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
IM40_01320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_22
AAA_15
AAA_29
AAA_18
AAA_23
RsgA_GTPase
AAA_16
AAA
MeaB
Motif
Other DBs
NCBI-ProteinID:
AIL12472
LinkDB
All DBs
Position
complement(252220..253899)
Genome browser
AA seq
559 aa
AA seq
DB search
MASYQYIYVMQGLSKTYPGGRQVLKDISLSFLPDAKIGIIGVNGAGKSTLMKIMGGIDKE
FQGEAWPAEGTKVGYLSQEPELDSNLDVLGNIMAGVHEAKALLERFEALSARFAEELSDD
EMNDLIAEQGEIQEKIEALNAWELDRTIEIAMDALRCPRGDAQVNQLSGGEKRRVALCRL
LLQHPDILLLDEPTNHLDAESVAWLEKFLQNYKGMVVLVTHDRYFLDNVVEWILELDRGQ
GIPFKGNYSGWLEHKRKLLEQEEKQEIDRQKTLERELDWIRQSPKARQSKSKARISAYQE
LLAKSHEKRTFTEQIIIPAGPRLGDLVIECQHLFKGFEDKLLIEDLNFQIPAGAIVGVIG
PNGVGKTSLFRILSNQETPDKGTLKFGETVKLGYVDQSRDALDDNKTVWEEISGGLDEIE
LGRSKMASRAYCARFNFKGSDQQKKVGLLSGGERNRVHLAKVLKSGSNVLLLDEPTNDLD
VETLRALEEALEDYAGCAIIISHDRWFLDRIATHILAFEGNSHIEWFQGNYSDYIVDRER
RLGSINSPQKIKYKPLIRQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttatcaatatatctatgttatgcaaggcttaagtaaaacgtatccaggcggg
cgccaagtattgaaagatatttctctatcttttttgcccgatgcgaaaattggaattatt
ggcgtgaatggagccggcaaatcaacattaatgaaaatcatgggaggtattgacaaagaa
ttccaaggagaagcatggccagccgagggcactaaagtgggttatctttcccaagaacct
gaacttgattcaaatctcgatgttctcggtaatattatggcaggcgtccatgaagcaaaa
gctttactagaacgttttgaagcacttagcgcgcgctttgcagaagaactttccgatgat
gaaatgaacgacctcattgctgaacaaggtgaaattcaagaaaaaattgaagcccttaat
gcatgggaattagatcgtacaatagaaattgcgatggatgccctccgctgcccccgtggc
gatgcccaagtaaaccaactttcaggaggagaaaaacgtcgcgttgctctttgcaggctt
cttctccaacatccagacatcctcttgctagatgagccaacaaaccatcttgatgctgaa
tctgtggcatggctcgaaaaatttctacaaaactataaaggtatggttgttcttgttaca
cacgatcgttacttcctagataatgttgttgaatggattttagaattagaccgaggacaa
ggcattccttttaaaggcaattactcgggctggcttgagcacaagagaaaacttcttgag
caagaagaaaaacaagaaattgatcgccaaaaaacacttgaacgagagttagattggatt
cgacaatcccctaaagcgcgccaaagtaaaagtaaagcacgtatttctgcttatcaagaa
ctcttagcaaaaagccatgagaaaagaacttttactgaacagatcattattccagcgggc
cctcgccttggagatcttgtcattgaatgccagcacctcttcaaaggatttgaggataag
ctacttattgaagatttaaattttcaaattcctgcaggagctattgtcggtgtaattggc
ccaaacggcgtaggaaaaacctctctttttcgtatactaagtaaccaagaaacccccgat
aaaggaactttgaaatttggcgaaacagtgaagctaggttatgtggatcaaagccgtgat
gctttagacgacaataaaactgtttgggaagaaatttctggtggccttgatgaaatagag
ttaggacgctcaaaaatggcaagccgcgcttactgtgctcgttttaactttaaaggttct
gaccagcagaagaaagtcggcctcctgtcgggaggagaacgaaatcgcgtacatctagca
aaagtacttaagtcaggatctaatgttcttcttcttgacgaaccaacaaatgatcttgat
gttgaaactctgcgcgctttagaagaagctctcgaggactatgcaggatgtgctattatt
attagccatgaccgttggtttttagatcgtatcgcgacacatatcctcgcctttgaggga
aatagccatatagaatggtttcaaggaaattattcagattatatagttgatcgggaacgg
cgcctaggatctattaactcccctcaaaaaataaaatataaacccctcataaggcaataa
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