Candidatus Paracaedimonas acanthamoebae: IM40_01500
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Entry
IM40_01500 CDS
T03240
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Pathway
caq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM40_01500 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caq03019
]
IM40_01500 (groEL)
03110 Chaperones and folding catalysts [BR:
caq03110
]
IM40_01500 (groEL)
03029 Mitochondrial biogenesis [BR:
caq03029
]
IM40_01500 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caq04147
]
IM40_01500 (groEL)
Enzymes [BR:
caq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IM40_01500 (groEL)
Messenger RNA biogenesis [BR:
caq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IM40_01500 (groEL)
Chaperones and folding catalysts [BR:
caq03110
]
Heat shock proteins
HSP60 / Chaperonin
IM40_01500 (groEL)
Mitochondrial biogenesis [BR:
caq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IM40_01500 (groEL)
Exosome [BR:
caq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IM40_01500 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
IM40_01500 (groEL)
Exosomal proteins of breast cancer cells
IM40_01500 (groEL)
Exosomal proteins of colorectal cancer cells
IM40_01500 (groEL)
Exosomal proteins of bladder cancer cells
IM40_01500 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AIL12499
LinkDB
All DBs
Position
291200..292861
Genome browser
AA seq
553 aa
AA seq
DB search
MSAKEVKFSTEARTRMLRGVDTLANAVKVTLGPKGRNVVLSKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGV
DLAVTAVVEDLKARSKKVSTSEEIAQVGTISANGESEIGKIISEAMDKVGKEGVITVEEA
KSFATELEVVEGMEFDRGYISPYFVTNAEKMVADLENPFILIHEKKLTGLQAMLPVLEKV
VQSGRPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKSMLEDIAILTNGQV
ISEDVGLKLENVTIDMLGTAKKVVIDKENTTIINGAGAAKDIEARCNQIRAQIEETTSDY
DREKLQERLAKLSGGVAVIHVGGATEVEVKERKDRVEDALNATRAAVEEGVVPGGGSALL
YAIPSLDKLKFANDEQRVGIDIVRRSLQAPIRQIVTNAGEDGSVVASKLMEGQDQKQGYD
AQTGQYVDMFKAGIIDPTKVVRTALQDAASVAGLLITTEAMVADIPEKKDAAPAMPGGMG
SMGGMGGMGGMDF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaaagaagtaaaattttcaactgaggcccgtacacgtatgctacgtggtgtt
gacacccttgcaaatgctgtaaaggtgactctcggccctaaaggtcgcaatgttgtttta
tcaaaaagtttcggtgcacctcgtattacaaaagatggtgtctctgttgcaaaagaaatt
gagcttgaagataagttcgaaaatatgggtgcgcaaatggtgcgcgaagtcgcaagcaag
accaatgatattgcaggcgatggtacgacaacagcaactgttttagcacaagcaatcgtc
cgtgaaggcgcaaaagctgttgcggcaggaatgaaccccatggatcttaagcgcggtgtt
gatttagctgttaccgctgttgttgaagatcttaaagcacgctcaaagaaagtctcaact
tctgaagaaattgctcaagttggaactatttctgcaaatggtgaatctgaaatcggtaag
attatttcagaagctatggataaggttggtaaagaaggcgttattacggttgaagaagca
aaatcatttgcaaccgagctcgaagtcgtcgaaggaatggaatttgatcgtggatacatt
tcaccctacttcgttacaaatgccgaaaagatggtagctgatcttgaaaatccattcatc
ttaattcatgaaaagaagctcacaggccttcaagcaatgttaccagttcttgaaaaagtt
gttcaatctggtcgtcctttgctcattattgctgaagatgttgaaggtgaagctcttgca
actctcgttgtgaataaacttcgtggtggtcttaaagtggctgctgttaaagctccaggt
ttcggtgatcgtcgtaaatcaatgcttgaagatattgcaattctcacaaatggacaagtc
atctcagaagatgttggtttgaagcttgagaatgtgacaattgacatgcttggaacagcg
aaaaaagtggttatcgataaagaaaacacgaccattattaatggggcaggcgctgcgaaa
gatattgaagcacgttgtaaccaaatccgtgctcaaattgaagagacgacatctgattat
gatcgtgaaaagcttcaagaacgcttggctaagctttcaggtggtgttgctgttattcac
gttggtggtgcaacagaagttgaagttaaagagcgcaaagatcgtgttgaagatgctctg
aatgcgacacgtgcagccgtagaagagggtgttgtccctggtggtggttctgctcttctt
tatgccattccttcgttggataagcttaaatttgcaaatgacgaacaacgcgtcgggatc
gatattgtccgtcgttctctccaagcgcctattcgccagattgtaactaatgcaggtgag
gatggttcagtcgttgcaagtaaactgatggaaggccaggatcaaaagcaagggtatgat
gcacaaacaggtcaatatgttgatatgtttaaggctggtatcattgatccaacgaaagtt
gttcgtacagcccttcaagatgcggcctctgttgctggtcttttgatcacgactgaagca
atggttgcggatattcctgagaagaaagatgctgctcctgcaatgccaggcggtatgggt
agcatgggcggaatgggcggcatgggtggaatggatttctaa
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