KEGG   Candidatus Paracaedimonas acanthamoebae: IM40_01705
Entry
IM40_01705        CDS       T03240                                 
Name
(GenBank) hypothetical protein
  KO
K11896  type VI secretion system protein ImpG
Organism
caq  Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:caq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:caq02044]
    IM40_01705
Secretion system [BR:caq02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IM40_01705
SSDB
Motif
Pfam: T6SS_TssF UPF0158
Other DBs
NCBI-ProteinID: AIL12524
LinkDB
Position
complement(323029..324846)
AA seq 605 aa
MPNLRPLFDYYQRELNYLRYQGSRFATQYPKIAQRLDFSAVESSDPHVERLLESFSYLTA
RLQRDIDDQFPRIAAAMLEVLYPHFISPLPSMTIAKFVSTPDKGKLTEVTKIPRKTSLFC
QTLDGETCRFETAYDVELAPISLKKAELISRRSLDLPSGILASTNCLLLRFETFGIELNR
INLKKLRFHLSGNSILQANLYEALFAQQTEIAVIPGGLSTPGNLQLLPQDSLYQVGFSPD
EAVIPYPSHAHAGYRLIYEYFHFPEKFLYAEIQNLHFTSNAKNFDILITLADDVFLSPND
INEMAFQLHTSPVINIFRKTSEPLKLDYRAHETRLVADFRREKTTEIHSIETVKAIFETR
EEVHEFAPYFSYNHNHVQREQKAFWSARRVPAMNPKLSGTDILLSFVDFEMNPQRPPSHI
IYAEVLCTNRILAQQLPAGSILQPENETPASHIYCLDKPTPQTTAPLEGVTLWRLISHLS
LNHLTLSNDPASLEALKEIMRLYSNTEHLPTPKELKALVGMSTKLVTRRVGVDAWRGFLQ
GTKVTLTFDKKDGEGGNLFLFSSVINHFFSLFAAVNSFTELEIINKNRKGIWKQWPAISG
SKRLI
NT seq 1818 nt   +upstreamnt  +downstreamnt
gtgccaaatttaagacctttatttgattattatcaacgggagcttaactatctgcgatac
caaggctcacgctttgcaacacaatatccaaaaatcgctcaaaggcttgattttagcgct
gttgaatcttctgatcctcatgtggagcgcctcttagaatctttttcttatctgacggca
cgtcttcaacgagatatcgatgatcaatttccacgaattgcggcagcaatgttggaagtt
ttatatccccactttataagcccgctcccgtcaatgaccattgctaaattcgtgtcaact
cctgataaaggtaaacttacagaagtcacaaaaattcctcgaaaaacatcccttttctgt
caaacacttgatggagaaacatgccgctttgaaacagcttatgacgttgaattagcgcct
attagcctcaagaaagccgaacttatctcaagaaggtcgcttgatcttccttctgggata
ttggcgtcgacgaattgtcttctcttgcgttttgaaacatttggaatagaacttaatcgt
attaatctaaaaaaattacgctttcatctctctggaaattctattcttcaagccaattta
tacgaagcgctgtttgcccaacaaactgaaattgctgttattccaggagggctatcaact
ccaggaaacctacagctactcccgcaagattctctttaccaagtcggattttccccagat
gaggctgttatcccttatccaagccatgctcacgccggctaccgccttatttatgaatat
ttccattttcctgaaaagtttctgtatgcagagatccaaaatttacatttcacaagcaat
gccaaaaactttgatattttaattactttggccgacgacgttttcttatctccgaatgat
atcaatgagatggctttccagcttcatacaagtcctgtcatcaatatatttagaaaaact
tctgaacccttaaaacttgattatcgagctcatgaaaccaggcttgtcgctgatttccgg
cgagaaaaaacaactgaaattcattcgattgaaaccgtcaaagccatctttgaaacacgc
gaagaagtccacgagttcgctccttatttctcctataatcataaccatgtccaacgggaa
caaaaagcattttggtctgcccgtcgtgttcccgccatgaaccctaaactttcgggcaca
gatattcttctctctttcgtggattttgagatgaacccacagcgtcctccttcacatatc
atctatgccgaagtcttgtgcacaaaccgtatattggcccaacaattacctgctggtagt
attttacaaccagaaaatgaaacacccgcctcgcatatttattgtttagataagccaact
ccgcaaacaacagctcctttagaaggggttactctatggcgcttgatttcacatttatca
cttaatcacttaactctctcaaatgatcctgcttctttggaagcccttaaggaaattatg
cgcctttattcaaacactgagcatcttcctacgcccaaagaacttaaagctcttgtggga
atgtcaacaaagcttgtaactcggcgtgtaggggtggatgcatggcgtggttttttgcaa
ggaacaaaagttactttaacttttgataaaaaggatggtgaaggagggaacttatttcta
ttctcttctgttataaaccatttcttctctttatttgctgcggtaaactcatttactgag
cttgaaattattaataaaaatcgcaaaggaatatggaaacaatggcccgccatctccggc
agcaaacggctaatttag

DBGET integrated database retrieval system