Candidatus Paracaedimonas acanthamoebae: IM40_01715
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Entry
IM40_01715 CDS
T03240
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caq03016
]
IM40_01715
Enzymes [BR:
caq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IM40_01715
Transfer RNA biogenesis [BR:
caq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IM40_01715
Prokaryotic type
IM40_01715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AIL12526
LinkDB
All DBs
Position
complement(326600..327340)
Genome browser
AA seq
246 aa
AA seq
DB search
MPRYKLTIEYDGTPFVGWQHQANGISVQSVIESAIEAFSREKVRLHAAGRTDAGVHALGQ
VAHIDLEKHFPAYKVREALNYHLRSYPVVIINAQETDELFHARFSAMERAYCYKVLCRSA
PPALDKKRVWYIKHPLNIEVMQQAAMFLIGKHDFTTFRASECQASSPIRTLNSFKITQEG
DLIFFNVSALSFLHHQVRNMVGSLKLVGEGKWSPEDFKSALDAKNRQAGGPTAPAQGLYF
IKVSYS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgccacgatacaaactaaccattgaatatgacggcaccccttttgtcggatggcagcat
caagcaaatggtatctcagttcaaagcgtgattgaatctgcgattgaggcgttctcgcga
gaaaaagtccgccttcatgcagctggtcgaacagatgcaggcgttcatgcgctgggacaa
gtcgctcatattgatcttgaaaaacattttccagcctataaagttcgagaagctttgaac
tatcatttacgctcttatccggttgtaattatcaatgcacaagagacggatgaactcttt
catgcgcgtttttcagccatggagagagcttattgctataaagttctttgccgatctgcg
cccccagcccttgataaaaaacgtgtttggtatataaaacatcctttgaatattgaagtc
atgcaacaagccgcaatgttcttgatcggtaaacatgattttaccacttttcgagcaagc
gagtgtcaagccagctctccgatacgcacccttaatagttttaaaatcacacaagaaggt
gatttaatcttttttaatgtctcggcgctttcctttcttcatcatcaagtacgaaatatg
gtgggaagccttaaactcgttggtgaagggaaatggagcccagaggactttaaaagcgcc
ttagatgcgaaaaaccggcaagctggaggtccaacagcgccagctcaaggtctttatttt
attaaggtctcttattcataa
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