Candidatus Paracaedimonas acanthamoebae: IM40_02940
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Entry
IM40_02940 CDS
T03240
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
caq
Candidatus Paracaedimonas acanthamoebae
Brite
KEGG Orthology (KO) [BR:
caq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caq03032
]
IM40_02940
03400 DNA repair and recombination proteins [BR:
caq03400
]
IM40_02940
Enzymes [BR:
caq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IM40_02940
DNA replication proteins [BR:
caq03032
]
Prokaryotic type
DNA Topoisomerases
IM40_02940
DNA repair and recombination proteins [BR:
caq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IM40_02940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AIL12712
LinkDB
All DBs
Position
complement(565912..568665)
Genome browser
AA seq
917 aa
AA seq
DB search
MTQATSPLSTDITPVSLEEEMRRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYAMKESG
NNPDRPYRKSASAVGYVMMKYHPHGNAPIYEALARLAQDFSMRLPLIDGQGNFGSMDGDP
PAAERYTEARLAKVSQFLLEDIEKETVDFKPNYDGSTTEPSVLPSRFPNLLVNGAGGIAV
GMATNIPPHNLGEVIDACFAYIDNPDITVDELLHYVPGPDFPTGAVILGRAGIREAAHTG
RGSVIMRGRVQIEEIRKDRTAIIITEVPYQVNKARMIERMAEVVKEKTIEGISDLRDESD
REGVRVVVELKRDAVPDVVLNQLYRHTPLQTSFGVNALALDKGQPRQMGLKDVIKAFIEF
REDVIVRRIKFELKKARERAHLLIGLAIAVANIDEMIALIKNAADPQTAREQMMNRTWPA
ASVAPLIELVAEPGNTFSNGTYRLSEAQARAILDLRLHRLTGLERDKIADELQQIVDQIK
EYLITLASRDKLYALMRQELTEVKEQFATPRRTTIEEALGEFDIEDLIQCEDMVVTVSQN
GYIKRVPLSTYRAQKRGGRGRSGMSTREEDFVRDVVVADTHTPVLFFSSGGKAFMLKVYQ
LPQGTPQSLGKPIINVLPFEQGETIATVLPLPKDPEELKNMSLVFVTSSGTVRRNSIDDF
LNVRANGKIAMKLEDGEQLIAVRACHNHQDLLLSSKEGRSVRFPVESLRVFASRSSTGVL
GIRLASGDRVISMSILESARATIEERDAYIRQSRKLRGGDETEIEETEEISEGSTFDLSP
ERFAELEANEQFILSVTENGMGKRTSAYEFRVTNRGAQGVTNTKLTSKTGKIVASFVVEG
DDQLVLVTNTGQLIRLPVKDIRICGRQAQGVMLFRVDNKEQVVSVARIPNQGNEEEEDEN
VSGNEESENVELTSSNP
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcaagccactagtcccttaagcacagacattacccccgtttcgctcgaagaggag
atgcggcgctcttatctcgattatgcgatgagcgtgatcgtaagccgtgctcttccagat
gtacgtgatggcttgaagcctgtccaccgacgcattctttacgcgatgaaagaatccgga
aataatcctgatcgcccctaccgtaaatccgcaagtgcggttggttatgtgatgatgaaa
tatcacccgcatggtaacgcaccaatttacgaagccttagcacgcttagcccaagatttc
tccatgcgtctgccgctcattgacggtcaaggaaactttggctccatggatggcgatcct
cctgcggctgaacgttataccgaagcacgccttgccaaagtttcacaattcttgcttgaa
gacattgaaaaagaaaccgttgattttaagccaaactatgatggcagcacaaccgaaccg
agcgttttaccgtcccgttttccaaacctcttggtcaatggagctggaggtattgctgtg
ggtatggccaccaacattccccctcataatttaggggaagttattgatgcttgttttgcc
tatattgataaccctgacattacggtggatgaacttcttcactatgttcctgggcctgat
ttcccaacgggggctgtgattttagggcgtgcgggaattcgggaagctgcccatacggga
cgtggttcagttattatgcggggacgcgttcaaattgaagaaattcgtaaagatcgtact
gccattattatcactgaagttccttatcaagtgaataaagcgcgcatgattgagcgcatg
gctgaggtcgtcaaagagaaaactattgaaggtatttcagatcttcgcgatgaatccgat
cgtgaaggtgttcgcgttgttgttgagcttaaacgagatgctgtaccggacgtcgttctc
aatcaactttatcgccatactccgcttcagacttcttttggggttaatgctcttgcgctt
gataaaggccaacctcgtcaaatggggttaaaagacgtcattaaggctttcattgaattt
cgtgaagatgttattgttcgccgcattaagtttgagcttaaaaaagcacgtgaacgggcg
cacctcttaattggtcttgccattgcggtcgccaatattgatgagatgattgcccttatc
aagaatgctgcagaccctcaaacagcccgcgagcaaatgatgaaccgtacctggcctgcg
gcttctgtagctcctttaattgaactggttgctgagcctgggaatacttttagcaatggg
acgtatcgcctttcagaagcccaagccagagcgatcctcgatttaagacttcatcgttta
acaggtcttgagcgcgataaaattgctgatgaacttcaacaaattgttgatcagattaaa
gaataccttattacccttgcctcacgagacaagctttatgcccttatgcgccaagagctt
actgaagtaaaagagcaatttgccacccctcgccgcacaacaattgaagaggctttaggt
gaatttgatattgaagacctgatccaatgcgaagatatggtcgtcaccgtcagtcaaaat
ggctacattaaacgcgtgcctctttccacctatcgggcgcaaaaacgcggtggccgcggt
cgttctggaatgtccacacgagaagaagattttgttcgtgatgttgtggtggccgatacg
catacacctgttctcttcttctcttcaggcggaaaagccttcatgctaaaagtttatcaa
cttccacaaggcacacctcaatctttaggaaagcccattattaacgttctgccttttgag
caaggtgagacgattgccaccgtccttccgttgcctaaagatccagaagaactgaagaat
atgtctcttgtgtttgtaacctcttcaggaactgtacgtcgtaactcaatcgatgatttc
ttaaacgtcagagccaacggaaaaattgcgatgaaactggaggatggtgaacaactcatt
gctgttcgcgcatgccataatcatcaagatctgttgctatcctcaaaagaaggacgcagc
gtccgctttcctgttgaaagcctccgcgtctttgcaagccgcagctcgacaggcgtgctc
ggaattcgccttgcatcaggggatcgcgttatttccatgagcatccttgaaagtgcccgc
gccacaattgaagaacgggatgcgtatattcgccaatcacgcaaattacgtggtggagat
gaaactgaaatagaagaaacagaagaaatctcagaaggctcaacctttgacctctcacct
gaacgatttgctgaactagaggctaatgaacaattcattctctcagtcacagaaaacggg
atgggcaagcggacatcagcctatgaattccgcgtgactaatcgtggagctcaaggggta
acgaataccaaactcacatcaaaaactggtaagatcgttgcttccttcgtggttgaagga
gatgatcaacttgtgctggtgacgaatacaggtcagcttatccgtcttcctgtaaaagat
attcgtatttgcggccgtcaagcccaaggcgtgatgcttttcagagtggataataaagaa
caagttgtctcggttgcccgcattccaaaccaagggaatgaggaagaggaagacgagaac
gtctcggggaatgaagaaagtgaaaatgttgaattaacctcttctaatccttga
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